Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 97.8 bits (242), Expect = 9e-25
 Identities = 67/168 (39%), Positives = 93/168 (55%), Gaps = 7/168 (4%)

Query: 235 QQIERWESYYRTIAEQDTLTGLKNRLGCEKFVLRKQR---ASTTMVLLLIDLDGFKQVND 291
           Q  ++  + YR ++  D LTG+ NR    + + R+ R         LL IDLD FK++ND
Sbjct: 240 QSTQQAVARYRHLSLHDPLTGIPNRAAFIEHLNRRTRHISMGAHTALLSIDLDRFKEIND 299

Query: 292 TLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIERFAAQL 351
             GHAAGD VLR IA R  ++ +    +F+  R+GGDEF          A+  E FA +L
Sbjct: 300 VHGHAAGDAVLRAIADRASSVLKA--GEFLA-RMGGDEFVAMTHSYYTRADGAE-FAQRL 355

Query: 352 IESSSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVK 399
           IE  S+P+    Q+  VG S+GIS  N+  ID + L+ QAD AMY  K
Sbjct: 356 IEQISKPVEWNGQTFSVGASVGISVRNTGSIDADTLMAQADVAMYRAK 403