Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  237 bits (604), Expect = 3e-66
 Identities = 155/529 (29%), Positives = 287/529 (54%), Gaps = 31/529 (5%)

Query: 278 DIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSAN 337
           D+A   A+ AA  K+EFLA +SHE+RTP+NGV+G T  +L T L+  Q DY+QTI  + N
Sbjct: 388 DLAASNAEIAA--KAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAGN 445

Query: 338 NLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIP 397
            LLT+IN+ILD SKLE+G++ L+++ F+   ++E+ +++    A ++ +E+   I P++P
Sbjct: 446 ELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISFIQPQVP 505

Query: 398 RGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISER 457
           R + GDP R++Q + +L+ N+++ T+ G + + V +   R     L+  V+D+G+ +   
Sbjct: 506 RVISGDPTRLRQAMLSLLENALQKTDEGEVLIVVALDD-RSTKPRLRIAVQDSGLPMEAA 564

Query: 458 QQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLH 517
           ++  L  +   +    S       LGLVI ++L+  M GE  + S  HQGST W TL L 
Sbjct: 565 ERDALLHSELHSKNFFSATRLNGHLGLVIARQLILLMNGEFGIKSGSHQGSTLWLTLPLD 624

Query: 518 TTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPE-------- 569
              L          L    +L+++ N     ++ Q     GL V   SA+P         
Sbjct: 625 PERLEHPTSDLDGPLKGARVLVVDDNDTCRKVLVQQCSAWGLNV---SAVPSGKEALALL 681

Query: 570 --EQHVYDYVLLNLAPSKETNPTLVEL--WVQRALAMTHNV-IVGVPSTELALADQLMQR 624
             + H+ DY  + L        T ++L   ++   ++ H++ ++ +     A +  + + 
Sbjct: 682 RTKAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIIARN 741

Query: 625 YPVK-CISKPLSRKKLLQTLAAQQPQLANTSLP------KPQADKLP--LCVMAVDDNPA 675
             +K  ++KP++   L  TLA +  Q +  ++P       P A  +P    ++  +DN  
Sbjct: 742 CGIKRILAKPVAGYTLKTTLADELTQRSKGNVPPRPVLNTPAAITVPTDFRILVAEDNSI 801

Query: 676 NLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLKG 735
           + K+I  +L +      + ++G+EA+E  +++++D++LMD +MP +DG +A + ++  + 
Sbjct: 802 STKVIRGMLGKLNLNPDTASNGEEALEAMKAQRYDLVLMDCEMPILDGFSATQQLRAWEV 861

Query: 736 YRD---TPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHW 781
                 TPV+A+TAH ++  ++R  +AGMD ++ KP+E   L++++  W
Sbjct: 862 SHQRVRTPVVALTAHILSEHKERARQAGMDGHMAKPVELSQLRELVEFW 910