Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 786 a.a., hybrid sensor histidine kinase/response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  227 bits (579), Expect = 2e-63
 Identities = 130/327 (39%), Positives = 202/327 (61%), Gaps = 19/327 (5%)

Query: 272 IQNV-ELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQ 330
           IQN  EL  AK+ A+++ RVK +FLANMSHE+RTP+NG+IG T  + KTQL + Q  +L+
Sbjct: 266 IQNERELTQAKEVAEKSVRVKEQFLANMSHEIRTPMNGIIGLTNVLQKTQLNDEQHKFLK 325

Query: 331 TIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITL 390
            I+ SANNL+ IIND+LDFSK+ + +   E+I F   E+++++V L  T A E+G  ++ 
Sbjct: 326 AIQTSANNLMQIINDLLDFSKITSQQFTFEHIAFCLPELVQDIVLLMETRASERGNRLST 385

Query: 391 KIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDT 450
            +D  +P+ ++GDPLR++QVL NLVGN+IKFT++G I + +     +D+ + L+F V DT
Sbjct: 386 YLDASVPQQLIGDPLRLKQVLLNLVGNAIKFTDQGEIKLLIHSIGQKDEKLMLEFTVEDT 445

Query: 451 GIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTF 510
           GIGI+E +   +F++F+Q     +R+YGGTGLGL I++ LV   GG +++ S    GS F
Sbjct: 446 GIGIAEDKLQVIFESFNQGSNDTTRKYGGTGLGLSISKHLVEMQGGTMAVRSHPKVGSAF 505

Query: 511 WFTLRL-----------HTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGL 559
            F+L              + E PL++   A +L    +LL E N     ++   L   G+
Sbjct: 506 TFSLPFGVQQPLPEQAPESEEQPLSE--PAGALGELRILLAEDNEINQLLIYTVLSDWGV 563

Query: 560 EV-TYRSAIPE----EQHVYDYVLLNL 581
            + T  + +      EQ  YD +L+++
Sbjct: 564 TLDTVFNGLEALQLFEQQEYDLILMDM 590



 Score = 89.4 bits (220), Expect = 8e-22
 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 641 QTLAAQQPQLANTSLPKPQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEA 700
           Q L  Q P+     L +P      L ++  +DN  N  LI  +L +    + +  +G EA
Sbjct: 515 QPLPEQAPESEEQPLSEPAGALGELRILLAEDNEINQLLIYTVLSDWGVTLDTVFNGLEA 574

Query: 701 IEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLKGYR-DTPVIAVTAHAMAGERDRLLKA 759
           ++  + +++D+ILMD+QMP MDG  A + I+++ G +  TP+IA+TAHA  GE ++ L A
Sbjct: 575 LQLFEQQEYDLILMDMQMPEMDGYEATRRIREMDGPKARTPIIALTAHATTGEIEKCLAA 634

Query: 760 GMDDYLTKPIEEHILQQVLVHWSPHTRSKQVAKVTPPDGAAVIS 803
           G D Y++KP E   L   +   +        A V P D A  I+
Sbjct: 635 GADAYVSKPFEPEYLYDTIYRLT----QCSTAIVLPSDAAPGIN 674



 Score = 43.1 bits (100), Expect = 7e-08
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 661 DKLP--LCVMAVDDNPANLKLITALLQER--VEYVVSCTSGQEAIEQAQSRQFDIILMDI 716
           D LP  L ++ +DD+  +   +   LQ+        +  + Q  +    ++ FD I +D 
Sbjct: 14  DALPEQLSILIIDDDKVDQMALMRSLQKSGLSTQTYTANTAQAGLRLLLAQTFDCIFIDF 73

Query: 717 QMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTK 767
            +P MDG+   + I +L+     PV+ VT+H       + ++ G  DYL K
Sbjct: 74  MLPDMDGLELMEHISKLE--LSAPVLVVTSHGDERIAAQAMRLGAADYLPK 122