Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  235 bits (599), Expect = 6e-66
 Identities = 138/287 (48%), Positives = 182/287 (63%), Gaps = 7/287 (2%)

Query: 280 AKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNL 339
           AK +A+E AR+K+ FLA MSHE+RTP+NGV+G    +  + LT  Q D+L+T + SA  L
Sbjct: 138 AKDKAEETARLKANFLATMSHEIRTPMNGVLGMLHLLTGSPLTPDQRDHLETAQSSARAL 197

Query: 340 LTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRG 399
           L IINDILDFSKLEAG++ LE   F+   +LEE+V L   +A +KGL ++L+I   +PR 
Sbjct: 198 LAIINDILDFSKLEAGQMKLEATKFDLHRLLEEMVALLKGAARDKGLTLSLRIADTVPRY 257

Query: 400 VVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQ 459
             GDP R++QVLTNL+GN++KFTE+G++ VSVE      D   L+F V DTGIGI     
Sbjct: 258 QAGDPTRLRQVLTNLMGNAVKFTEKGDVAVSVEPE--ESDSSRLRFEVADTGIGIEPAAA 315

Query: 460 AQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTT 519
             LF  F QAD+SI+RR+GGTGLGL I ++LV  MGGEI   S   +G+TF FTL L + 
Sbjct: 316 PALFSEFVQADSSITRRFGGTGLGLSICKRLVEMMGGEIGFDSIPGEGTTFHFTLPL-SA 374

Query: 520 ELPLNDGYNAD----SLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVT 562
            LP  D   A+     L    +LL E N     +    L + G  VT
Sbjct: 375 ALPDQDSGAAEDAGPDLPPMAVLLAEDNPVNQKLTTTLLDRWGQRVT 421



 Score = 89.4 bits (220), Expect = 5e-22
 Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 1/129 (0%)

Query: 643 LAAQQPQLANTSLPKPQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIE 702
           L+A  P   + +      D  P+ V+  +DNP N KL T LL    + V    +G EAI 
Sbjct: 372 LSAALPDQDSGAAEDAGPDLPPMAVLLAEDNPVNQKLTTTLLDRWGQRVTLARNGAEAIA 431

Query: 703 QAQSRQFDIILMDIQMPHMDGVTACKAIKQLKG-YRDTPVIAVTAHAMAGERDRLLKAGM 761
                 FD++LMD+ MP +DG+ A + I+ + G     P+IA+TA  M G+    L AGM
Sbjct: 432 AVARDHFDLVLMDVHMPGIDGLEATRRIRAMSGPVAKIPIIAMTADVMDGDAALCLDAGM 491

Query: 762 DDYLTKPIE 770
           DDY+ KP+E
Sbjct: 492 DDYVAKPVE 500