Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 727 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  273 bits (699), Expect = 2e-77
 Identities = 182/545 (33%), Positives = 288/545 (52%), Gaps = 30/545 (5%)

Query: 249 HVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNG 308
           H   QHS D+   +     EQL ++N  +++AK++A+  A+ K+EF+A +SHE+RTP+NG
Sbjct: 80  HTITQHS-DEIDIEQELANEQLRLENERINLAKEQAESLAQAKTEFVAVVSHEVRTPMNG 138

Query: 309 VIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQE 368
           ++G T+ +L T LT  Q D   T+  S   LL I++++LD SK+EAGKL +E++  +  +
Sbjct: 139 LLGMTQLLLDTPLTQEQRDIAGTVMSSGRLLLNILDELLDLSKIEAGKLQIEHLEVKVVD 198

Query: 369 VLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNID 428
           ++EE   L +  A E+GL +   I P +P  V GDP R++QVL NL+GN+IKFTE+G++ 
Sbjct: 199 LVEESFGLMSMRATERGLAVAHAIAPDVPAMVTGDPSRLRQVLLNLIGNAIKFTEKGSVT 258

Query: 429 VSV-EMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVIT 487
           ++V  +   R     L+F V DTGIGI E  + QLF+ + QA A +SR++GGTGLGL I 
Sbjct: 259 LTVTRVPVHRTGGEGLRFAVADTGIGIPEEARDQLFRRYVQAAAWVSRKFGGTGLGLSIC 318

Query: 488 QKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIEPNMQAA 547
           ++LV  MGGEI + S   QGS FWF + L    +  + G +  +     LLL+EP     
Sbjct: 319 RQLVELMGGEIGVDSVAGQGSVFWFQIPL--IPVAASPGRSRPAHAPARLLLLEPEAPVR 376

Query: 548 AIVQQTLVQSGLEV--TYRSAIPEEQHVYDYVLLNLAPSKETNPTLVELWVQRALAMTHN 605
             +   L   G++V    +++        D +LL              + +  A  +  N
Sbjct: 377 TALTTILAGWGIQVMEATKASAATLGRPGDVLLLG-----------GRMALSEAQVLARN 425

Query: 606 V-IVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQTL----------AAQQPQLANTS 654
             +  +  + L       +   V  + +P+    L++ L                L +  
Sbjct: 426 SGLAAIILSPLGTTPTTGETDAVAILPEPVREAALIRALDQFGAPGRAIGPGPADLPHRG 485

Query: 655 LPKPQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILM 714
               QA +  L V+ V+DNP N ++    L  +   V+   +G +A+E   S   DIILM
Sbjct: 486 QEAAQAGQ-SLTVLVVEDNPVNRRVAGGFLSRQGHTVLMAENGAQALEVIASHPVDIILM 544

Query: 715 DIQMPHMDGVTACKAIKQL-KGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHI 773
           D  MP MDG+ A +A++ +       PV+A+TA A   E    L AGM+D+++KP     
Sbjct: 545 DRHMPVMDGLQAVRALRAMPPPAGHLPVVALTAAATREEARECLDAGMNDFISKPFTPEQ 604

Query: 774 LQQVL 778
           L + +
Sbjct: 605 LTEAI 609