Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 956 a.a., two-component system sensor histidine kinase RcsC from Serratia liquefaciens MT49

 Score =  231 bits (589), Expect = 2e-64
 Identities = 164/510 (32%), Positives = 263/510 (51%), Gaps = 34/510 (6%)

Query: 284 AQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYL-QTIEKSANNLLTI 342
           A++A++ KS FLA +SHELRTPL G+IG    +L+T+      D L   +  S+  LL I
Sbjct: 465 AEQASQSKSMFLATVSHELRTPLYGIIG-NLDLLQTKALPQGVDRLVNAMNNSSGLLLKI 523

Query: 343 INDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVG 402
           I+DILDFSK+E+ +L +E   F   EV+  +         +K L +   I+  +P  + G
Sbjct: 524 ISDILDFSKIESEQLKIEPREFSCLEVITHIAGNYLPLVVKKRLGLYCFIEQNVPERISG 583

Query: 403 DPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQL 462
           DP+R+QQVL+NL+ N+IKFT+ G I + V  R        L+F VRDTG+GI E++  +L
Sbjct: 584 DPVRLQQVLSNLLNNAIKFTDTGCIILQVCTRGNY-----LEFSVRDTGVGIPEKEITRL 638

Query: 463 FQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELP 522
           F  F Q  + + R + GTGLGL I +KL++ M G+I++ S    GS F   + L + + P
Sbjct: 639 FDPFFQVGSGVQRHFQGTGLGLAICEKLINMMDGDIAVESEPGLGSLFTIRIPLFSAQFP 698

Query: 523 LNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPEEQHVYDYVLLNLA 582
           +     +D+   + L L   N +  + + + L   G  V        +      V+L+  
Sbjct: 699 IPQ--PSDTWQGKTLWLDIRNQRLESYLMEILGGYGATVLRHQG---QDTAEGEVMLSDH 753

Query: 583 PSKETNPTLVELWVQRALAMTHNVIVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQT 642
           P   + P L ++      ++ H          +  + +    Y +   S P     LL  
Sbjct: 754 PLMISTPLLAQI----QFSIEH----------IGPSQETRPGYWMHSTSTPRETLVLLNR 799

Query: 643 LAAQQPQLANT--SLPKPQ----ADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTS 696
           L   Q +  NT   LP P      D   + ++ VDD+P N +L++  L      VV+   
Sbjct: 800 LFGTQAESGNTLAQLPVPAKASLIDNGDIHLLVVDDHPINRRLLSDQLSSLGYQVVTAND 859

Query: 697 GQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRL 756
           G +A++       DI+L D+ MP+MDG    + +++++    +PVI VTA+A+A E+ R 
Sbjct: 860 GVDALDVLSRNTVDIVLTDVNMPNMDGYHLTQRLREMQ--FASPVIGVTANALAEEKQRC 917

Query: 757 LKAGMDDYLTKPIEEHILQQVLVHWSPHTR 786
           ++AGMD+ L+KP+    L+Q L  +S   R
Sbjct: 918 IEAGMDNCLSKPVTLETLEQTLAFYSQQVR 947