Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 918 a.a., hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) from Escherichia coli BW25113

 Score =  902 bits (2330), Expect = 0.0
 Identities = 496/926 (53%), Positives = 649/926 (70%), Gaps = 21/926 (2%)

Query: 5   YGLRARVMTLTLAPTLIIGLLLSALFSFNRYHDLETQVINSGASIIEPLAIASEDALRMQ 64
           Y LRAR+M L LAPT++IGLLLS  F  +RY+DL+ Q+ ++GASIIEPLA+++E  + +Q
Sbjct: 4   YSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQ 63

Query: 65  SRESVRRIISYAHRKNSKLVRSIAVFDANHELFVTSNFHPNFEKLMYPKDKPIPFLSSSV 124
           +RES+ ++IS  HR++S +VR+I+V+D N+ LFVTSNFH +   +    + P P   +  
Sbjct: 64  NRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVT 123

Query: 125 IDENTLILRTPIISERTVLD---NGDANPATPVMGYIAIELDLSSLRLQQYQEIFSAGLV 181
            D + +ILRTPIISE    D   + DA  +  ++GYIA+ELDL S+RLQQY+EIF + ++
Sbjct: 124 RDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVM 183

Query: 182 LVIGILLSGVFASRLMYDVTRPITHMKNMVDRIRRGHLDVRIEGKMHGELDTLKKGINAM 241
           ++  I ++ +F  RLM DVT PI +M N VDRIRRG LD R+EG M GELD LK GIN+M
Sbjct: 184 MLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSM 243

Query: 242 AVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHE 301
           A+SL+ YH EMQH+IDQATSDLRETLEQ+EIQNVELD+AKKRAQEAAR+KSEFLANMSHE
Sbjct: 244 AMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHE 303

Query: 302 LRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALEN 361
           LRTPLNGVIGFTR  LKT+LT +Q D+L TIE+SANNLL IIND+LDFSKLEAGKL LE+
Sbjct: 304 LRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILES 363

Query: 362 IPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKF 421
           IPF  +  L+EVV L A S+H+KGLE+TL I   +P  V+GDPLR+QQ++TNLVGN+IKF
Sbjct: 364 IPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKF 423

Query: 422 TERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTG 481
           TE GNID+ VE RAL +  + ++  +RDTGIGI ER Q++LFQAF QADASISRR+GGTG
Sbjct: 424 TENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTG 483

Query: 482 LGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIE 541
           LGLVITQKLV+ MGG+IS  S+ ++GSTFWF + L      + +G +   L  + L  +E
Sbjct: 484 LGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVE 543

Query: 542 PNMQAAAIVQQTLVQSGLEVTYR---SAIPEEQHVYDYVLLNLAPSKETNPTLVELWVQR 598
           PN  AA      L ++ LEV Y    SA+P     YD +LL +A +     T+    + +
Sbjct: 544 PNSAAAQCTLDILSETPLEVVYSPTFSALPPAH--YDMMLLGIAVTFREPLTMQHERLAK 601

Query: 599 ALAMTHNVIVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQTLAAQQPQLANTSLPKP 658
           A++MT  +++ +P      A++L Q     C+ KPL+  +LL  L        NT LP  
Sbjct: 602 AVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVT 661

Query: 659 QADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQM 718
              KL + VMAVDDNPANLKLI ALL++ V++V  C SG +A+E+A+   FD+ILMDIQM
Sbjct: 662 DESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQM 721

Query: 719 PHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVL 778
           P MDG+ AC+ I QL   + TPVIAVTAHAMAG++++LL AGM DYL KPIEE  L  +L
Sbjct: 722 PDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLL 781

Query: 779 VHWSPHTRSKQVAKVTPPDGAAVISNALPSSPPAEEAIIDWPVALRQSANKEDLAKEMLG 838
           + + P   S   ++V  P+   ++ N          A +DW +ALRQ+A K DLA++ML 
Sbjct: 782 LRYKP--GSGISSRVVTPEVNEIVVN--------PNATLDWQLALRQAAGKTDLARDMLQ 831

Query: 839 MLVDYLREVETVVNTALEDEEYPASDLLHHIHKLHGSCSYSGVPRLRKICASLEQALRNG 898
           ML+D+L EV   V   L  E      L+  IHKLHGSC YSGVPR++ +C  +EQ LR+G
Sbjct: 832 MLLDFLPEVRNKVEEQLVGEN--PEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSG 889

Query: 899 ASIDELEPELFELQDEMAKVL-EASR 923
              ++LEPEL EL DEM  V  EAS+
Sbjct: 890 TKEEDLEPELLELLDEMDNVAREASK 915