Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 947 a.a., Signal transduction histidine kinase from Kangiella aquimarina DSM 16071

 Score =  561 bits (1446), Expect = e-164
 Identities = 339/939 (36%), Positives = 536/939 (57%), Gaps = 52/939 (5%)

Query: 5   YGLRARVMTLTLAPTLIIGLLLSALFSFNRYHDLETQVINSGASIIEPLAIASEDALRMQ 64
           +G+  R+MTL L PT+++ LLL  LF  N  +D +  +   G +I   LA+ASE  L   
Sbjct: 4   WGISKRIMTLALTPTILVALLLGTLFISNHINDSKYSLTARGKTIATHLALASEYGLITL 63

Query: 65  SRESVRRIISYAHRKNSKLVRSIAVFDANHELFVTSNFHPNFEKLMYPKDKPIPFLSSSV 124
             +++  + + A R N K + ++A+FD N+ +  +         +    D P     S  
Sbjct: 64  DEKNLAEM-AQAARDNDKDLMAVAIFDQNNRVLASVGSAETLSVMSI--DNPYSLARSGS 120

Query: 125 IDENTLILRT-----------PIISE-----RTVLDNGDANPATPVMGYIAIELDLSSLR 168
            +      RT           PIIS+      +  +   AN    ++GY+A+ +      
Sbjct: 121 SNNLMRFARTAESEQGKLFYAPIISKFPETYESWQNYSQAN--AQLLGYVAVMMTDEFSA 178

Query: 169 LQQYQEIFSAGLVLVIGILLSGVFASRLMYDVTRPITHMKNMVDRIRRGHLDVRIEGKMH 228
           + +Y  I +   + +IG+L+ G  A R+   VT PI  M   ++RI+ G LD RIE + +
Sbjct: 179 ISRYNTILTTLFITLIGLLIGGFLARRMSMSVTTPIEKMVEGINRIKDGRLDTRIESEAN 238

Query: 229 GELDTLKKGINAMAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAA 288
            EL TL++GIN MA ++     EMQ ++DQAT DLRETLE LE+ N+ELDIA+++A EA+
Sbjct: 239 AELLTLQEGINLMAENMEHNQDEMQLAVDQATEDLRETLETLEVNNLELDIARRQALEAS 298

Query: 289 RVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILD 348
           RVK+EFLANMSHE+RTP+NGVIGFT  +LKT+L N Q D+L  I++SA +LL+II+DILD
Sbjct: 299 RVKTEFLANMSHEIRTPMNGVIGFTELLLKTELNNKQKDFLFDIKRSATSLLSIIDDILD 358

Query: 349 FSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQ 408
           +SK+EAGK++ E  PF+ +E ++++  +   +A++KG+E+   I   +P+ ++GDP+RI+
Sbjct: 359 YSKIEAGKMSFERYPFDLRECVDDIFRMLGPNANKKGIELVSLIYSDVPKALLGDPIRIK 418

Query: 409 QVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQ 468
           Q++TNLV N+IKFT+ G++++  E+ +     + L+  V+D+GIG+++ QQ  LF+AFSQ
Sbjct: 419 QIITNLVNNAIKFTKSGSVELYAEVESENKKGLKLKIQVKDSGIGLTQEQQRNLFKAFSQ 478

Query: 469 ADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGYN 528
           AD+S  R +GGTGLGLVI++ LV  MGG I + S   +GSTFWFTL+   T+    DG  
Sbjct: 479 ADSSTKREFGGTGLGLVISKSLVEKMGGNIGVNSNQGEGSTFWFTLQCERTDALPEDGLT 538

Query: 529 ADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPEEQHVYDY-------VLLNL 581
            + L ++ +L+ +P+      + Q L + G+ V     I +     D        + L +
Sbjct: 539 GEFLANKSVLVFDPHPSTRLSITQILEEWGMLVRSFEKIDDLMTEIDLYSQSGKSIELII 598

Query: 582 APSKETNPTLVELWVQRALAMTHNVIVGVPSTELALADQLMQRYPV---KCISKPLSRKK 638
              +       +L      A T      +  T    AD L   + +   + ++KP++ + 
Sbjct: 599 IGGQRFRRRQQQLEYICNKAQTQLYCPIITFTTAGNADFLEHLHSIGVNRAMTKPVTHRA 658

Query: 639 LLQTL--AAQQPQLANTSLP--KPQADK---LPLCVMAVDDNPANLKLITALLQERVEYV 691
           L  +L    + P + +   P   P  D      + V+AVDDNPANL+L+T LLQ+    V
Sbjct: 659 LYNSLIELLKTPSIHSGKEPAEAPVGDASLLKDIYVLAVDDNPANLRLVTTLLQDLNIKV 718

Query: 692 VSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAG 751
            +  SG +A+  ++++ +D ILMDIQMP MDG+ A + I+  +   +TP+IA+TAHAMA 
Sbjct: 719 DAAESGMQAVSLSKNKVYDAILMDIQMPEMDGLEATRTIRANRTNLNTPIIALTAHAMAS 778

Query: 752 ERDRLLKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQVAKVTPPDGAAVISNALPSSPP 811
           ER++LL+AGMDDY+TKP+ E  L  +L+ W   T++      TP     +       S  
Sbjct: 779 EREQLLEAGMDDYMTKPVSEQALVNLLLKW---TQAASDINPTPTVQQEIEDENRNQS-- 833

Query: 812 AEEAIIDWPVALRQSANKEDLAKEMLGMLVDYLREVETVVNTALEDEEYPASDLLHHIHK 871
                +DW ++L+ + N E LA +ML MLVD   +    ++ A + +++    LL H+HK
Sbjct: 834 -----LDWSLSLKLANNNEQLAIDMLKMLVDSNFDTGRNIHAAYQSQDF--DQLLQHVHK 886

Query: 872 LHGSCSYSGVPRLRKICASLEQALRNGA--SIDELEPEL 908
           LHG+  Y G P+L+ +    E  L+      ++EL  +L
Sbjct: 887 LHGASCYVGTPKLKHLSNVYETLLKKQQYNKLEELHEQL 925