Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 919 a.a., Uncharacterized domain of BarA-like signal transduction histidine kinases from Enterobacter asburiae PDN3

 Score =  897 bits (2318), Expect = 0.0
 Identities = 493/922 (53%), Positives = 642/922 (69%), Gaps = 24/922 (2%)

Query: 5   YGLRARVMTLTLAPTLIIGLLLSALFSFNRYHDLETQVINSGASIIEPLAIASEDALRMQ 64
           Y LRAR+M L LAPT++IGLLLS  F  +RY+DL+ Q+ ++GASIIEPLA++SE  + +Q
Sbjct: 4   YSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQ 63

Query: 65  SRESVRRIISYAHRKNSKLVRSIAVFDANHELFVTSNFHPNFEKLMYPKDKPIPFLSSSV 124
           +RES+ ++IS  HR++S +VR+I+V+D ++ LFVTSNFH +   L  P   P P   + +
Sbjct: 64  NRESIGQLISVLHRRHSDIVRAISVYDEHNRLFVTSNFHLDPAALKIPDGTPFPRHLTVL 123

Query: 125 IDENTLILRTPIISERTVLDNG---DANPATPVMGYIAIELDLSSLRLQQYQEIFSAGLV 181
              + +ILRTPI+SE    D     DA  +  ++GY+A+ELDL S+RLQQY+EIF +G++
Sbjct: 124 RRGDIMILRTPIVSESYSPDESAQSDAKSSNNMLGYVALELDLKSVRLQQYKEIFISGVM 183

Query: 182 LVIGILLSGVFASRLMYDVTRPITHMKNMVDRIRRGHLDVRIEGKMHGELDTLKKGINAM 241
           ++  I ++ +F  RLM DVT PI +M N VDRIRRG LD R+EG M GELD LK GIN+M
Sbjct: 184 MLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSM 243

Query: 242 AVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHE 301
           A+SL+ YH EMQH++DQATSDLRETLEQ+EIQNVELD+AKKRAQEAAR+KSEFLANMSHE
Sbjct: 244 AMSLAAYHEEMQHNVDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHE 303

Query: 302 LRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALEN 361
           LRTPLNGVIGFTR  LK++L  +Q D+L TIE+SANNLL IIND+LDFSKLEAGKL LE+
Sbjct: 304 LRTPLNGVIGFTRLTLKSELNPTQRDHLHTIERSANNLLAIINDVLDFSKLEAGKLILES 363

Query: 362 IPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKF 421
           IPF  +  L+EVV L A S+H+KGLE+TL I   +P  V+GDPLR+QQV+TNLVGN+IKF
Sbjct: 364 IPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKF 423

Query: 422 TERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTG 481
           TE GNID+ VE R++  + + ++  +RDTGIGI ER Q++LFQAF QADASISRR+GGTG
Sbjct: 424 TESGNIDILVEKRSISSNKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTG 483

Query: 482 LGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIE 541
           LGLVITQ+LV+ MGG+IS  S+ ++GSTFWF + L      L DG   D L  + L  +E
Sbjct: 484 LGLVITQRLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVLTDGPVTDCLKGKRLAYVE 543

Query: 542 PNMQAAAIVQQTLVQSGLEVTYR---SAIPEEQHVYDYVLLNLAPSKETNPTLVELWVQR 598
           PN  AA      L  + LEV Y    SA+  E   YD +L+ +  +     T+ +  + +
Sbjct: 544 PNAAAAQCALDILSTTPLEVVYSPTFSALAVEH--YDILLMGIPVTFTGELTMQQERLAK 601

Query: 599 ALAMTHNVIVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQTLAAQQPQLANTSLPK- 657
           A +MT  +++ +P      A++L       C+ KPL+  +LL  L  +  +L+  +LP  
Sbjct: 602 AASMTDYLLLALPCHAQINAEELKNDGAAACLLKPLTSTRLLPAL-TEYCRLSQHALPLI 660

Query: 658 PQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQ 717
               KLP+ VMAVDDNPANLKLI ALL+++V++V  CTSG +A+EQA+  QFD+ILMDIQ
Sbjct: 661 DDEQKLPMSVMAVDDNPANLKLIGALLEDQVQHVELCTSGAQAVEQAKQMQFDLILMDIQ 720

Query: 718 MPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQV 777
           MP MDG+ AC+ I QL   + TPVIAVTAHAMAG++++LL AGM+DYL KPI+E  L  +
Sbjct: 721 MPGMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIDEEKLHNL 780

Query: 778 LVHWSP-HTRSKQVAKVTPPDGAAVISNALPSSPPAEEAIIDWPVALRQSANKEDLAKEM 836
           L+ + P H             G   +S+        + A  DW +ALRQ+A K DLA+EM
Sbjct: 781 LLRYKPGHI-----------GGTYTVSSEPVEISVNQNATFDWQLALRQAAGKPDLAREM 829

Query: 837 LGMLVDYLREVETVVNTALEDEEYPASDLLHHIHKLHGSCSYSGVPRLRKICASLEQALR 896
           L MLV +L E+   V   L  E     DLL  IHKLHGSC YSGVPRL+ +C  LEQ LR
Sbjct: 830 LQMLVAFLPEIRNKVEEQLVGEN--PEDLLEAIHKLHGSCGYSGVPRLKNLCQLLEQQLR 887

Query: 897 NGASIDELEPELFELQDEMAKV 918
            G    ELEPE  EL DEM  V
Sbjct: 888 AGTPESELEPEFLELLDEMDNV 909