Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 948 a.a., Signal transduction histidine kinase from Enterobacter asburiae PDN3

 Score =  224 bits (570), Expect = 3e-62
 Identities = 163/517 (31%), Positives = 262/517 (50%), Gaps = 41/517 (7%)

Query: 284 AQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQT-IEKSANNLLTI 342
           A++A++ KS FLA +SHELRTPL G+IG    +L+T+      D L T +  S++ LL I
Sbjct: 463 AEQASQSKSMFLATVSHELRTPLYGIIG-NLDLLQTKELPKGVDRLVTAMNNSSSLLLKI 521

Query: 343 INDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVG 402
           I+DILDFSK+E+ +L +E   F  +EV+  +          K L +   I+P +P  + G
Sbjct: 522 ISDILDFSKIESEQLKIEPREFSPREVMNHISANYLPLVVRKQLGLYCFIEPDVPLTLHG 581

Query: 403 DPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQL 462
           DP+R+QQV++NL+ N+IKFT+ G I + V       D + ++  VRDTG+GI  ++  +L
Sbjct: 582 DPMRLQQVISNLLSNAIKFTDVGCIVLHV---CRAGDYLSIR--VRDTGVGIPAKEVVRL 636

Query: 463 FQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELP 522
           F  F Q    + R + GTGLGL I +KLVS M G+IS+ +    GS F   + L++ + P
Sbjct: 637 FDPFFQVGTGVQRNFQGTGLGLAICEKLVSMMDGDISVDTEPGMGSQFTIRIPLYSAQYP 696

Query: 523 LNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEV-TYRSAIPEEQHVYDYVLLNL 581
                  D L+ +   L   N      +   L  SG+ V  Y    P+   V D ++ + 
Sbjct: 697 AK--ATVDGLSDKRCWLAVHNASLNDYLTALLAHSGVRVCRYEGQTPD---VDDVLIADE 751

Query: 582 APSKETNPTLVELWVQRALAMTHNVIVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQ 641
            P +         W  R   +     +G+P          ++R P + +    +  +LL 
Sbjct: 752 MPEQP--------WQGRGSVLFCRRHIGIP----------VERAPGEWVHSVATPHELLS 793

Query: 642 TLA-----AQQPQLANTSLPKPQ---ADKLPLCVMAVDDNPANLKLITALLQERVEYVVS 693
            LA       + +     LP P+   +    + ++ VDD+P N +L+   L        +
Sbjct: 794 LLARIYKVELEERDGAGGLPSPESLASVNDDMMILVVDDHPINRRLLADQLGSLGYQCKT 853

Query: 694 CTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGER 753
              G +A+        DI+L D+ MP+MDG    + I+QL      PV+ VTA+A+A E+
Sbjct: 854 ANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLG--LTLPVVGVTANALAEEK 911

Query: 754 DRLLKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQV 790
            R L++GMD  L+KP+   +L+Q L  ++   R  ++
Sbjct: 912 QRCLESGMDSCLSKPVTLDVLKQTLSIYADRVRKTRI 948