Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 954 a.a., two-component system sensor histidine kinase RcsC from Dickeya dianthicola ME23

 Score =  233 bits (595), Expect = 3e-65
 Identities = 174/519 (33%), Positives = 269/519 (51%), Gaps = 39/519 (7%)

Query: 284 AQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQT-IEKSANNLLTI 342
           A++A++ KS FLA +SHELRTPL G+IG    +L+T+L  S A+ L T ++ S++ LL I
Sbjct: 464 AEQASQSKSMFLATVSHELRTPLYGIIG-NLDLLQTKLLPSDANRLVTAMQNSSSLLLKI 522

Query: 343 INDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVG 402
           I+DILDFSK+E+ +L +E   F  +EV+  +V+       +K L +   IDP +P  ++G
Sbjct: 523 ISDILDFSKIESEQLKIEPSEFAPREVINHIVSNYLPLVVKKRLVLYCYIDPDVPFRLMG 582

Query: 403 DPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQL 462
           D +R+QQVL+NL+ N+IKFT+ G I   V   A  DD   L F VRDTG+GI  R   +L
Sbjct: 583 DAVRLQQVLSNLLSNAIKFTDTGCIVFQV---ACCDDGY-LVFKVRDTGVGIDTRAVMKL 638

Query: 463 FQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELP 522
           F  F QA   + R + GTGLGL I +KLVS M G+I++ S L  GS F   + L+    P
Sbjct: 639 FDPFFQAGTGVQRHFQGTGLGLAICEKLVSLMDGDITIESELGLGSEFGIRIPLYRAHYP 698

Query: 523 LNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEV-TYRSAIP---EEQHVYDYVL 578
                    L  +   L   N      +   L   GL+   Y    P   ++  ++D+V 
Sbjct: 699 --QTLPVPDLQGKTYWLQIRNALMERYLLGLLNTGGLDAQRYEEGQPVGRDDVMIFDHV- 755

Query: 579 LNLAPSKETNPTLVELWVQRALAMTHNVIVGVPSTELALADQLMQRYPVKCISKPLSRKK 638
                  +T P     WV+            +   +   A ++   Y +   +       
Sbjct: 756 ------PDTLPN-AYAWVE------------ISGMQAGAAQEIRTGYWLYSTAALHELPV 796

Query: 639 LLQTLAAQQPQLANTSLPKP-----QADKLPLCVMAVDDNPANLKLITALLQERVEYVVS 693
           LLQ +   + +L   +L  P     + +   + ++ VDD+P N +L+   L      VV+
Sbjct: 797 LLQRIYRGEDELPTAALSLPSVSYNRTENGGIRLLVVDDHPINRRLLADQLGSLGYQVVT 856

Query: 694 CTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGER 753
              G +A++       DI+L D+ MP+MDG    + ++++   +  PVI VTA+A+A ER
Sbjct: 857 ANDGLDALDVLAKNPVDIVLTDVNMPNMDGYRFTQRLREMG--QTLPVIGVTANALAEER 914

Query: 754 DRLLKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQVAK 792
            R L+AGMD+ L+KP+    LQQ L ++S   R  +  +
Sbjct: 915 QRCLQAGMDNCLSKPVTLDTLQQSLSYYSNSVRQNKAVQ 953