Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 908 a.a., Signal transduction histidine kinase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  308 bits (790), Expect = 8e-88
 Identities = 188/526 (35%), Positives = 317/526 (60%), Gaps = 34/526 (6%)

Query: 280 AKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNL 339
           AK++A+ A R KS+F+++MSHE+RTPLNGVIGF+  +  T L  SQ  Y+  I +SA +L
Sbjct: 384 AKQQAESANRAKSDFISSMSHEIRTPLNGVIGFSDLLSSTSLDASQRQYINLINQSAKSL 443

Query: 340 LTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRG 399
           + I+NDILDFSK+EAGKL +E  P E   +  E VNL A  AH+K LE+ L ID  IP  
Sbjct: 444 MEIVNDILDFSKIEAGKLEIEKAPTEMYALGIEAVNLIAFHAHKKKLELILDIDEDIPFS 503

Query: 400 VVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVE-MRALRDDVIDLQFMVRDTGIGISERQ 458
           V+ D LR++Q+L NL+GN++KFT +G I + +  +R+L +    ++FMV+DTG GI+++ 
Sbjct: 504 VMADQLRLKQILINLLGNAVKFTSKGEIILKISYVRSLPNGEATIRFMVKDTGTGINKKN 563

Query: 459 QAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRL-- 516
           QA++F AF+Q D+S SR++GGTGLGL I++KL+  M  +I L S + +GSTFWF L L  
Sbjct: 564 QAKIFSAFTQEDSSTSRKFGGTGLGLAISKKLLEMMDSQIHLESEMGKGSTFWFDLDLVV 623

Query: 517 ---HTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSA------- 566
              +  E+P      +  L++R +L+I+ N +   ++  T+++  L+ T + A       
Sbjct: 624 LKKNAEEVP------STLLSNRQVLVIDDNKRHRQVI-STIIRR-LKGTSKLAKNDAQAQ 675

Query: 567 -IPEEQHVYDYVLLNLAPSKETNPTLVELWVQRAL--AMTHNVIVGVPSTELALADQLMQ 623
            + E++  +D +L+N +       +L++   +  L    T  +++       A   + + 
Sbjct: 676 SLLEKEGPFDLILINQSLYSIDGISLIKKLQENTLIPETTKVILMHNAFVRDATLPEHVD 735

Query: 624 RYPVKCISKPLSRKKLLQTLAAQQP--QLANTSLPKP----QADKLPLCVMAVDDNPANL 677
            + +K   KP     + Q L   +P  ++++T LP+P    + + +    +  +DN  N+
Sbjct: 736 AFLIKPFKKP-DFLDIAQKLFNTEPVHEVSSTILPQPNDLKELEVISPTFLIAEDNMVNM 794

Query: 678 KLITALLQERV--EYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLKG 735
            L   LL+  V    ++   +G++A+E  Q+ + D+I MDIQMP ++G  A + I++++G
Sbjct: 795 ILTKKLLRSLVPKSTILEAKNGKQAVEVFQNNEVDMIFMDIQMPVLNGYEATQKIREIEG 854

Query: 736 Y-RDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVH 780
             R TP+IA+TA  +  E+ +   AG+DD+  KP+++  + ++L+H
Sbjct: 855 TDRHTPIIALTAGILNNEKQKSQTAGLDDFTAKPMDKEAITKILLH 900