Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 1265 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  304 bits (778), Expect = 3e-86
 Identities = 231/677 (34%), Positives = 336/677 (49%), Gaps = 48/677 (7%)

Query: 256  IDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQ 315
            + +  +D+    E L+    E D  + RA+ A + KSEFLA MSHE+RTP+NG+ G T  
Sbjct: 569  LQRQAADMCALAEGLDAAREEADALRARAEAATQAKSEFLAAMSHEIRTPMNGIQGMTEL 628

Query: 316  MLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVN 375
            +  T LT+ Q  + Q I  S+N LLTIINDILD SKLEAG++ +E +PF+  +++E VV 
Sbjct: 629  LFDTPLTDEQRQFAQAIRSSSNALLTIINDILDISKLEAGRVTIETLPFDAADLVEGVVE 688

Query: 376  LQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRA 435
            L    AHEKG+EI   IDP + R ++GDP RI+Q+L NLVGN++KFT+RG++ V +E+  
Sbjct: 689  LLTPRAHEKGIEIGFYIDPLLRRTLLGDPTRIRQILVNLVGNAVKFTDRGSVAVELEVLD 748

Query: 436  LRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMG 495
              D  + L+  V DTGIGI       LF  F Q D SI+R++GGTGLGL I ++L   MG
Sbjct: 749  ATDAHLVLRITVTDTGIGIPAEAMPTLFNKFQQVDGSITRKFGGTGLGLAICRQLSELMG 808

Query: 496  GEISLTSRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIEP---NMQAAAIVQQ 552
            G I++ S L  GS F   L L  +E  L        L  R +L+++    N +  A +  
Sbjct: 809  GSIAVESSLGIGSRFLVDLPLALSEEALPPA--EQPLAGRSVLVVDDLAVNRRVLASMLD 866

Query: 553  TL------VQSG---LEVTYRSAIPEEQHVYDYVLLN-LAPSKETNPTLVELWVQRALAM 602
            +L      V+SG   LE   R A       +D VL +   P    +  L  +    AL  
Sbjct: 867  SLGAWPTCVESGPDALEALRRGAAGGRP--FDVVLADQTMPGMGGDTLLATVAGDPALIG 924

Query: 603  THNVIVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQTL----AAQQPQLANTSLPKP 658
            T  V++      +              +++PL +  L   L    AA  P  A +++P  
Sbjct: 925  TRRVLIVTLGPAVRGESGPAPGLAHATLNRPLRQSSLAACLTGLFAAAAP--AASAVPSA 982

Query: 659  QADKLPLC----VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILM 714
            +A    +     ++  +DN  N    T LL+     V     G++A+  A     D++LM
Sbjct: 983  EAKVEDVLRRGRILLAEDNRTNQLFATTLLRRLGYTVEVAEDGEQAVAAACRGGLDLVLM 1042

Query: 715  DIQMPHMDGVTACKAIKQLKG-YRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHI 773
            D+QMP MDG+ A +AI+   G     P+IA+TA AM G R+  L+AGM DYLTKPI    
Sbjct: 1043 DVQMPGMDGLEAAQAIRARGGALAGLPIIALTADAMPGTRELCLRAGMSDYLTKPISRAG 1102

Query: 774  LQQVLVHW----SPHTRSKQVAKVTPPDGAAVISNALPSSPPA-EEAIIDWPVALRQSAN 828
            L   L  W     P   + +    +    AAV  +       A +EA++D  V       
Sbjct: 1103 LLSALDRWIGTAEPPAAAAEAGGGSGKGSAAVNDDGSGEDGEALDEAVLDDLV------- 1155

Query: 829  KEDLAKEMLGMLVD-YLREV-ETVVNTALEDEEYPASD-----LLHHIHKLHGSCSYSGV 881
             E +  + L ++VD +L +V   +   +  D+  PA       L    H L       G 
Sbjct: 1156 -ETVGADSLALIVDSFLEDVSHRLERLSAMDDAMPAGTVDLRALAQEAHDLSSLAGSFGG 1214

Query: 882  PRLRKICASLEQALRNG 898
              +  I   +E   RNG
Sbjct: 1215 MAVMHIAWRMEVLCRNG 1231