Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score =  257 bits (657), Expect = 1e-72
 Identities = 171/528 (32%), Positives = 281/528 (53%), Gaps = 21/528 (3%)

Query: 252 MQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIG 311
           M+ ++ ++ + L    EQ E    E       A+ A++ KSEFL++MSHELRTP+NG+ G
Sbjct: 1   MERTVKRSFAKLTSLKEQAESSADE-------ARRASKAKSEFLSSMSHELRTPMNGLFG 53

Query: 312 FTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLE 371
                L     + +  YL+  E +   LL +INDILD SK+EAGK+ +E  P +  +VL+
Sbjct: 54  MIE--LAIDNPDKRNIYLRKAETAGRQLLVLINDILDISKIEAGKIKIEQAPVDLLQVLD 111

Query: 372 EVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSV 431
           +VV+LQ    H KGLE     DP +P  + GD  RI Q+L NL+ N+IKFTE+G++ + V
Sbjct: 112 DVVSLQRVYCHRKGLEFHYLKDPDLPHVIKGDITRISQILHNLLSNAIKFTEQGSVTLKV 171

Query: 432 EMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLV 491
                R +   L F V DTGIGI   +   +F+ F QAD S +R YGGT LGL I ++L 
Sbjct: 172 TY-TKRPNGNYLSFDVIDTGIGIESSKLDNIFKKFEQADQSTTREYGGTELGLSIAKQLA 230

Query: 492 SHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQ 551
             M G+I++TS + QGSTF FT+    ++LP  D     S N R  ++ +          
Sbjct: 231 KLMLGDINVTSFVGQGSTFSFTMAAEESQLP--DINVEPSANLRCAIVDDLQTSREYFEH 288

Query: 552 QTLVQSGLEVTYRSA---IPEEQHVYDYVLLNLAPSKETNPTLVELWVQRALAMTHNVIV 608
                S +  +Y SA   + +    +D ++L+L+  + +   L+E            +I+
Sbjct: 289 VVTSMSIVPQSYDSAKAYLSDSPLAFDVIILDLSMPEMSGVDLLEQLKAMNPDKFPKIIL 348

Query: 609 GVPSTELALADQLMQRYPVKCISKPLSRKKLLQTLA--AQQPQLANTSLPKPQADKLPLC 666
                E    +  +     +  +KP++R++L   L    +   +++  + +    K    
Sbjct: 349 ISAELERLEDENDVSELIWRTHAKPINRRELEHDLGRLIETKPVSHNDVKEGNKKKR--- 405

Query: 667 VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTA 726
           ++  +DN  N +++  +LQ      +   +G++A++  +  QFD+ILMD  MP M G+ A
Sbjct: 406 ILLAEDNEINAEIVKTILQSEGYKFLHVKNGKDAVDVGKRHQFDLILMDCNMPVMGGIEA 465

Query: 727 CKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHIL 774
              +++     DTP++A+TA+A A +++  L AGM D+L KP+++  L
Sbjct: 466 STILRKALEV-DTPIVALTANAFAEDKEECLAAGMTDFLAKPLDKDTL 512