Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 875 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score =  225 bits (573), Expect = 1e-62
 Identities = 171/545 (31%), Positives = 275/545 (50%), Gaps = 45/545 (8%)

Query: 276 ELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKS 335
           +L  A   AQ A + KS+FLA MSHE+RTP+N +IG T   L++     +  YL+ +++S
Sbjct: 172 KLQKAYDEAQSANKAKSDFLATMSHEIRTPMNAIIGLTHLALESTDNEQRQQYLEKVQRS 231

Query: 336 ANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPK 395
           +  LL ++N ILDFSK+EA K+ + + PF   + ++++  +    A +K L++   I   
Sbjct: 232 STALLDLMNSILDFSKVEADKIEIIDEPFTLTKTIDKLAQVFQVKAQQKQLQLLFDIRCH 291

Query: 396 IPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGIS 455
                 GD  +I QVL NL+ N+IKFT  G++ ++VE R  +     L F V DTG+GIS
Sbjct: 292 TNLQCRGDSEKIYQVLLNLLSNAIKFTASGHVILTVEKRENQ-----LAFSVSDTGMGIS 346

Query: 456 ERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLR 515
           E+ +++LF+AF QADASISR YGGTGLGL I ++LV  MGG+++L S + +GS F F L 
Sbjct: 347 EQVKSKLFKAFVQADASISREYGGTGLGLAICKRLVELMGGDLTLESEVDKGSCFSFALP 406

Query: 516 LHTTELPLNDGYNADSLNHRHLLL--IEPNMQAAAIVQQTLVQSGLEVTYRSAIPEEQHV 573
           + + E P        S+    L +   E   Q   I+  TL +  +             +
Sbjct: 407 VCSDEGPGTGPQLPVSVPDNVLCIQTHESVSQGCEILAATLNRHNIHC----------QI 456

Query: 574 YDYVLLNLAPSKETN-----PTLVELWVQRALAMTHNVIVGVPSTEL--ALADQLMQR-- 624
            D V   L PSK +      P   + W      M       +  T L   L  Q +Q+  
Sbjct: 457 IDQV-EGLLPSKASQTIAFLPDDEQSWNSFIKHMQFGEYQSLNLTTLISPLNKQDVQKRM 515

Query: 625 -----YPVKCISKPLSRKKLLQTLAAQQPQLANTSLPKPQADK------LPLCVMAVDDN 673
                  +  I  P +  +L+ TL+  Q  L+  ++   ++ K      L   V+ VDD+
Sbjct: 516 GSALVQNINIIELPFTDTELISTLSPAQLSLSKRTIEGLESRKWRTRRLLNKHVLVVDDD 575

Query: 674 PANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQL 733
             ++++   +L +    V   +SG++A+   +  +FD IL+D  +P + G    + + Q 
Sbjct: 576 AISVEISQQILSDLGINVAVASSGEQALALCEMSKFDAILLDCYLPGVSGYEVAEQLTQK 635

Query: 734 KGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKP-IEEHILQQVLVHWSPHTRSKQVAK 792
           K +  TP+IA++A       +  L AGM  +L KP   + I+  + +H           +
Sbjct: 636 KDWY-TPIIALSADESQEASESALTAGMCQHLVKPATADEIVHTIDIH-----IHSGYIE 689

Query: 793 VTPPD 797
           +TPPD
Sbjct: 690 ITPPD 694