Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 919 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score =  341 bits (875), Expect = 1e-97
 Identities = 205/553 (37%), Positives = 326/553 (58%), Gaps = 17/553 (3%)

Query: 234 LKKGINAMAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSE 293
           L+ G+ + A+ + +   +++  ++QAT+DLR  +E +E QN  LDIA+K A +A+ VKS+
Sbjct: 375 LEAGLFSFAL-MEKSRGQLESEVEQATNDLRNNMELIEEQNARLDIARKDAIKASNVKSQ 433

Query: 294 FLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLE 353
           FLANMSHE+RTPLN ++GF++++    L   Q + ++ +  +A+NLLTI+NDILDFSK+E
Sbjct: 434 FLANMSHEIRTPLNAILGFSKELNNASLPTDQQEQVRIVNTAADNLLTIVNDILDFSKIE 493

Query: 354 AGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTN 413
           AGKL + N PF   ++LEE+V + A S+H K +E    + P +P  ++GD  RI+QVL N
Sbjct: 494 AGKLQINNQPFSPNKLLEEMVTIMAKSSHSKRIEFVFDLHP-LPEKLIGDVFRIKQVLNN 552

Query: 414 LVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASI 473
           L+ N++KFT  G I  SV  R+L   + ++   V DTGIGIS + + +LF AFSQ D ++
Sbjct: 553 LLSNALKFTSSGTITFSVSGRSLPHGIHEVNITVEDTGIGISRQDRKKLFNAFSQVDDAL 612

Query: 474 SRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGY---NAD 530
           +R Y GTGLGLVI+++LV  M G+++L S L QGSTF  +LR++     L+  Y   +++
Sbjct: 613 NRNYQGTGLGLVISRELVRLMNGDLTLKSVLGQGSTFNVSLRMN----QLSQKYALTSSE 668

Query: 531 SLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPEEQHV---YDYVLLNLAPSK-E 586
               +++++ +P           L   G +VT   ++     +   YD+ +  +  SK  
Sbjct: 669 DWKGKNVVIFDPVPATRRSSASMLSILGAQVTSVESLDYLMSLKGQYDFFMATVPVSKMG 728

Query: 587 TNPTLVELWVQRALAMTHNVIVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQTLAAQ 646
              T +  +VQ        ++        A    L Q +  +    P++  K L +L   
Sbjct: 729 LRDTYLSRFVQ--FPAQKRILWYSGPEPFAQYPSLSQHFHSQA-RMPMTLTK-LDSLVHH 784

Query: 647 QPQLANTSLPKPQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQS 706
               A  ++ +         ++AVDD   NLKL+   L      + +  SGQ+A+ Q Q+
Sbjct: 785 HTTPAKNAMQEKIGTLPKAKILAVDDMEMNLKLLHTWLDHSPVELTTTISGQDAVNQCQT 844

Query: 707 RQFDIILMDIQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLT 766
           ++FD+ILMD+QMP MDG+ A + I++      TP++AVTAHA   E++RLL +GMDDYL 
Sbjct: 845 QEFDLILMDVQMPGMDGLQATREIRKSPLNMGTPIVAVTAHAFKEEQERLLASGMDDYLP 904

Query: 767 KPIEEHILQQVLV 779
           KPIE  +L  +++
Sbjct: 905 KPIEVELLIPIVL 917