Pairwise Alignments

Query, 440 a.a., 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., tRNA (uracil(54)-C(5))-methyltransferase from Enterobacter asburiae PDN3

 Score = 84.3 bits (207), Expect = 6e-21
 Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 15/182 (8%)

Query: 270 FIQVNRAVNQHMVVQALNWLEVSPQERVLDLFCGLGNFTLPLAKQAQAVVGVEGVDEMVQ 329
           F Q N A+N  M+  AL   E S  + +L+L+CG GNF+L LA+    V+  E     V 
Sbjct: 192 FTQPNAAMNVQMLEWALKATEGSTGD-LLELYCGNGNFSLALARNFDRVLATEIAKPSVA 250

Query: 330 HATHNAKLNQINNVAFYQANLEQDMTSASWAQQ------------KFAKVLLDPARAGAE 377
            A +N   N I+NV   +   E+   + +  +Q            +   + +DP R+G +
Sbjct: 251 AAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRQFNRLEGIDLKSYQCETIFVDPPRSGLD 310

Query: 378 GIVDQLSALGAKRVVYVSCNPATLARDSQSLLSQGFRLEKLGMLDMFPHTSHLESMALFV 437
              +++      R++Y+SCNP TL ++ ++ L Q  ++E+L + D FP+T H+E   L  
Sbjct: 311 SETEKM-VQAYPRILYISCNPETLCKNLET-LGQTHKVERLALFDQFPYTHHMECGVLLT 368

Query: 438 KK 439
            +
Sbjct: 369 AR 370