Pairwise Alignments

Query, 738 a.a., GTP diphosphokinase from Vibrio cholerae E7946 ATCC 55056

Subject, 704 a.a., (p)ppGpp synthetase, RelA/SpoT family from Enterobacter asburiae PDN3

 Score =  392 bits (1006), Expect = e-113
 Identities = 224/680 (32%), Positives = 366/680 (53%), Gaps = 40/680 (5%)

Query: 64  ILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLNVTMH 123
           IL  + +D  TL+AALL  +        + +E+ +G+ V +L+ GV ++    +LN    
Sbjct: 55  ILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKL---DKLNFR-- 109

Query: 124 GSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECANIYAP 183
             +  AQ +N R+M++AMV D R ++IKLA+R  N+R + +   + RR  A+E   IY+P
Sbjct: 110 -DKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSP 168

Query: 184 LANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEMKQSG 243
           LA+RLGI  +K E+E+  F    P+ Y+ I + +   R  R++ I+  +S++   ++++G
Sbjct: 169 LAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAG 228

Query: 244 INAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTKYKHLP 303
           I   VSGR KH+YSI+ KM  K   F  + D+ A R+I      CY  LG +H+ YK  P
Sbjct: 229 IPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVHDSDTCYRVLGQMHSLYKPRP 288

Query: 304 NEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESELGVAAHWKYKE-GSSA 362
               DY+A PK NGYQS+HT ++GP G  +E+QIRT+ M + +E+GVAAHW YKE G  +
Sbjct: 289 GRMKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGGES 348

Query: 363 ARSGYDEKITWLRKLLDWQEEMSDSGEMLDELRSQVFDDRVYAFTPKGDVVDLPMGATPL 422
           + +       W++ LL+ Q+    S E ++ ++S +F D +Y FTP+G +V+LP GATP+
Sbjct: 349 STTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPV 408

Query: 423 DFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEIITAKEPNPSRDWLNPSLGFVHS 482
           DFAY +H+++GH C+GA+V  +  P +  L  G  VEIITA    P+  WLN    FV S
Sbjct: 409 DFAYAVHTDIGHACVGARVDRQPYPLSQPLSSGQTVEIITAPGARPNAAWLN----FVVS 464

Query: 483 GRARAKINAWFRKQSREKNLEAGREILEIELAKIGANLKHAE------AYALKRFNVNSV 536
            +ARAKI    +   R+ ++  GR +L   L   G + K AE         L+R  + S+
Sbjct: 465 SKARAKIRQLLKNLKRDDSVSLGRRLLNHAL---GGSRKLAEIPQENVQRELERMKLASL 521

Query: 537 DEMYVGIGSGDLRINQIVNHINALVNKPTAEEEDKLALEKLQENKTLTPNRPHKDAVVVE 596
           D++   IG G        N ++ +V K   ++ D  A+    ++    P         ++
Sbjct: 522 DDLLAEIGLG--------NAMSVVVAK-NLQQGDTTAVPATTQSHGHLP---------IK 563

Query: 597 GVDNLMTHLARCCQPIPGDEIRGYITQGRGISVHRSDCEQLEELSLHAPERIIDTVWGSG 656
           G D ++   A+CC+PIPGD I  +++ G+G+ +H   C  +      A E+ +   W   
Sbjct: 564 GADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEA-EKFMAVEWDKE 622

Query: 657 FVGSYLLTVRVEAMERSGLLKDITTLLANEKVKVASMKSRSDYKRQIIIMDFDLEVNNVE 716
               ++  ++V+     G L ++T  +      + S+ +     R +      L   +  
Sbjct: 623 TAQEFITEIKVDMFNHQGALANLTAAINTASSNIQSLNTEEKDGR-VYSAFIRLTARDRV 681

Query: 717 ALARVSKRIEQIKDVMLVKR 736
            LA + ++I  + DV+ V R
Sbjct: 682 HLANIMRKIRVMPDVIKVTR 701