Pairwise Alignments

Query, 403 a.a., multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., 2', 3'-cyclic nucleotide 2'-phosphodiesterase from Pseudomonas simiae WCS417

 Score =  441 bits (1133), Expect = e-128
 Identities = 222/401 (55%), Positives = 292/401 (72%)

Query: 1   MQIYLVGGAVRDQLLQLPVYDRDWVVVGSSPQAMLAAGFQAVGKDFPVFLHPNSKEEHAL 60
           M+IY VGGAVRD+LL +PV D D VVVG+S + MLA G++ VG DFPVFL P + +E+AL
Sbjct: 1   MKIYKVGGAVRDRLLGIPVTDIDRVVVGASAEEMLAKGYKPVGADFPVFLDPRNGDEYAL 60

Query: 61  ARTERKTSVGYTGFACHYAPDVTLEEDLLRRDLTINAMAQDNSGQLIDPYGGQRDLAAKV 120
           ARTERK+  GY GF  H +P+VTLEEDL+RRDLTINAMA+D+ G L DPY GQRDL  ++
Sbjct: 61  ARTERKSGRGYGGFVFHASPEVTLEEDLIRRDLTINAMAEDDDGNLTDPYHGQRDLEGRI 120

Query: 121 LRHVSPAFVEDPLRVLRVARFAAKLHHLGFTVAEETMQLMAKIAQSGELQHLTAERVWQE 180
           LRHVSPAF EDPLRVLRVARFAA+  HLGFTVA ET++LM ++++SGEL+ LT ER W+E
Sbjct: 121 LRHVSPAFAEDPLRVLRVARFAARYAHLGFTVAPETLELMRQLSESGELEALTPERSWKE 180

Query: 181 WHKSLSAHHPEMFLQVLRDCGALAVVLPEIDRLFGVPQPEKWHPEIDTGIHTLMVAKQAA 240
             ++L    P++F+QVLR+C AL  ++PE+D LFGVPQP   HPEIDTG+HTL V +QAA
Sbjct: 181 ISRALMEDQPQVFIQVLRECDALKTLMPEVDALFGVPQPAAHHPEIDTGVHTLSVLEQAA 240

Query: 241 QLSDSLLVRFAAQVHDLGKGVTPPSEWPRHKLHCHTGLNIIESLCERIRVPNEFRDLALA 300
                L VR+A  +HDLGKG TP  + P+H  H H GL +I+++ ER +VP + ++LAL 
Sbjct: 241 LHQQPLTVRWACLLHDLGKGTTPMDKLPQHIAHEHRGLKLIKAVNERFKVPRDCQELALL 300

Query: 301 VCAQHSNIHRADELKPTTKLKVLGLLDVWRKPERLEQVLLCCEADHRGRLGLESEPYPQR 360
           V   H++ HRA ELK +T L++L   DV+R+P+R E+ ++ CE D RGR GLE   YPQ 
Sbjct: 301 VGEYHTHGHRALELKASTLLELLHNFDVYRRPQRFEEFVVACEMDARGRKGLEQRSYPQA 360

Query: 361 EIFLRAYQAALGVAVQAVIADGFQGKHIKEELDKRRVSAIE 401
                A +AA  VAV  ++  GF+G  + E L + R+ A++
Sbjct: 361 AYLRGAAKAAREVAVAPLLEKGFKGPELGEALKRERLKALK 401