Pairwise Alignments

Query, 403 a.a., multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., Multifunctional CCA protein from Escherichia fergusonii Becca

 Score =  498 bits (1281), Expect = e-145
 Identities = 243/400 (60%), Positives = 298/400 (74%)

Query: 1   MQIYLVGGAVRDQLLQLPVYDRDWVVVGSSPQAMLAAGFQAVGKDFPVFLHPNSKEEHAL 60
           M+IYLVGGAVRD LL LPV DRDWVVVGS+PQ ML AG+Q VG+DFPVFLHP + EE+AL
Sbjct: 1   MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60

Query: 61  ARTERKTSVGYTGFACHYAPDVTLEEDLLRRDLTINAMAQDNSGQLIDPYGGQRDLAAKV 120
           ARTERK+  GYTGF C+ APDVTLE+DL RRDLTINA+AQD++G++IDPY G  DL  ++
Sbjct: 61  ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120

Query: 121 LRHVSPAFVEDPLRVLRVARFAAKLHHLGFTVAEETMQLMAKIAQSGELQHLTAERVWQE 180
           LRHVSPAF EDPLRVLRVARFAA+  HL F +A+ET+ LM ++  +GEL+HLT ERVW+E
Sbjct: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLSFRIADETLALMREMTHAGELEHLTPERVWKE 180

Query: 181 WHKSLSAHHPEMFLQVLRDCGALAVVLPEIDRLFGVPQPEKWHPEIDTGIHTLMVAKQAA 240
              +L+  +P++F QVLRDCGAL V+ PEID LFGVP P +WHPEIDTGIHTLM    AA
Sbjct: 181 TENALTTCNPQVFFQVLRDCGALRVLFPEIDALFGVPAPARWHPEIDTGIHTLMTLSMAA 240

Query: 241 QLSDSLLVRFAAQVHDLGKGVTPPSEWPRHKLHCHTGLNIIESLCERIRVPNEFRDLALA 300
            LS  + VRFA   HDLGKG+TPP  WPRH  H   G+ ++E LC+R+RVPNE RDLA  
Sbjct: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300

Query: 301 VCAQHSNIHRADELKPTTKLKVLGLLDVWRKPERLEQVLLCCEADHRGRLGLESEPYPQR 360
           V   H  IH    L P T +K+   +D WRKP+R+EQ+ L  EAD RGR G ES  YPQ 
Sbjct: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360

Query: 361 EIFLRAYQAALGVAVQAVIADGFQGKHIKEELDKRRVSAI 400
                A++ A  V  +AV+  GF+G  I+EEL +RR++A+
Sbjct: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400