Pairwise Alignments

Query, 403 a.a., multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., HD domain-containing protein from Bacteroides stercoris CC31F

 Score =  115 bits (287), Expect = 4e-30
 Identities = 112/391 (28%), Positives = 185/391 (47%), Gaps = 45/391 (11%)

Query: 1   MQIYLVGGAVRDQLLQLPVYDRDWVVVGSSPQAMLAAGFQAVGKDFPVFLHPN------- 53
           ++ Y+VGG VRD  LQ P  D D VVVGS   AM  A  + +G+   + +  N       
Sbjct: 30  LECYVVGGYVRDIFLQRPSKDIDVVVVGSG-IAMAEALARRLGRGAHLSVFKNFGTAQLK 88

Query: 54  ---SKEEHALARTERKTSVGYTGFACHYAPDVTLEEDLLRRDLTINAMA----QDNSGQL 106
              ++ E   AR E  T             D +LE+D  RRD TINA+A        G+L
Sbjct: 89  YHGTEVEFVGARKESYTHDSRKPI----VEDGSLEDDQNRRDFTINALAVCLNSQRYGEL 144

Query: 107 IDPYGGQRDLAAKVLR-HVSP--AFVEDPLRVLRVARFAAKLHHLGFTVAEETMQLMAKI 163
           +DP+GG  D+  K +R  + P   F +DPLR++R  RFA +L+   F + ++T + + + 
Sbjct: 145 VDPFGGMADMKEKTIRTPLDPDITFSDDPLRMMRCIRFATQLN---FYIDDDTFESLYR- 200

Query: 164 AQSGELQHLTAERVWQEWHKSLSAHHPEMFLQVLRDCGALAVVLPEIDRLFGVPQPEKWH 223
                +  ++ ER+  E +K L +  P      L   G L ++ PE+  L GV +     
Sbjct: 201 -NKERISIISKERIADELNKILLSPVPSKGFIDLDRSGLLQLIFPELVALQGV-ETRNGR 258

Query: 224 PEIDTGIHTLMVAKQAAQLSDSLLVRFAAQVHDLGKGVT----PPSEWPRHKLHCHTGLN 279
              D   HTL V    ++ +D+L +R+AA +HD+ K  T    P + W  H  H   G  
Sbjct: 259 AHKDNFYHTLEVLDNISKKTDNLWLRWAALLHDIAKPATKRWEPRAGWTFHN-HNFIGEK 317

Query: 280 IIESLCERIRVP-NEFRDLALAVCAQHSN-IHRADELKPTTKLKVLGLLDVWRKPERLEQ 337
           +I  +  R+++P NE       +   H   I  AD++   + ++ L    ++   + ++ 
Sbjct: 318 MIPDIFRRMKLPMNEKMKYVQKLVGLHMRPIVIADDVVTDSAVRRL----LFEAGDDIDD 373

Query: 338 VLLCCEADHRGRLGLESEPYPQREIFLRAYQ 368
           ++  CEAD      + S+   +++ FL  +Q
Sbjct: 374 LMTLCEAD------ITSKNMERKQRFLNNFQ 398