Pairwise Alignments

Query, 403 a.a., multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., Multifunctional CCA protein from Alteromonas macleodii MIT1002

 Score =  305 bits (780), Expect = 2e-87
 Identities = 184/412 (44%), Positives = 243/412 (58%), Gaps = 31/412 (7%)

Query: 1   MQIYLVGGAVRDQLLQLPVYDRDWVVVGSSPQAMLAAGFQAVGKDFPVFLHPNSKEEHAL 60
           MQ+YLVGGAVRD LL   V +RD+VVVG++P+ ML+ GF  VGKDFPVFLHP ++EE+AL
Sbjct: 1   MQVYLVGGAVRDALLNRKVVERDYVVVGATPEEMLSQGFTQVGKDFPVFLHPKTQEEYAL 60

Query: 61  ARTERKTSVGYTGFACHYAPDVTLEEDLLRRDLTINAMAQDNSGQLIDPYGGQRDLAAKV 120
           ARTERK+  GYTGF C  +  VTLEEDLLRRDLT+NA+AQDN G+LIDPYGG++DL  +V
Sbjct: 61  ARTERKSGKGYTGFVCDASSSVTLEEDLLRRDLTVNAIAQDNYGKLIDPYGGKKDLENRV 120

Query: 121 LRHVSPAFVEDPLRVLRVARFAAKLHHLGFTVAEETMQLMAKIAQSGELQHLTAERVWQE 180
           LRHVS AF EDPLRV RVARFAA+  +LGFT+A ETM LM  +A+SGEL  L+AERVWQE
Sbjct: 121 LRHVSEAFSEDPLRVFRVARFAARYAYLGFTIATETMALMQSMAESGELSTLSAERVWQE 180

Query: 181 WHKSLSAHHPEMFLQVLRDCGALAVVLPEIDRLFGVPQPEKWHPEIDTGIHTLMVAKQAA 240
             +SL    P +F  VL     L     E++              +DT + TL  A    
Sbjct: 181 TKRSLLEKTPHVFFTVLNQAHGLNDWFTELE------------SNLDTALATLKTAVDLE 228

Query: 241 QLSDSLLVRFAAQVHDLGKGVTPP----SEWPR-----HKLHCHTGLNIIESLCERIRVP 291
           +  +  +V+      D G G   P    SE  R       L  H      + LC R++V 
Sbjct: 229 KAENESVVK------DTGSGTPLPESSDSETARLITRFTALLTHLNEEEAKQLCSRLKVQ 282

Query: 292 NEFRDLALAVCAQHSNIHRADELKPTTKLKVLGLLDVWRKPERLEQVLLCCEADHRGRLG 351
           N+  ++ +  C     +  A    P   L +    D WR+ ER   +LL   A +    G
Sbjct: 283 NQLSEIVILTCKFKGFLLNAQN-SPADLLALFNGCDAWRREERF-TLLLSAFAPYAQNKG 340

Query: 352 LESEPYPQREIFLRAYQAALGVAVQAVIADGFQGKHIKEELDKRRVSAIEAL 403
           ++ +   QR+    A  AA  V VQ +IA G +G  IK+ L++ ++SAI ++
Sbjct: 341 IDWQ--RQRKRIENALAAANQVNVQDIIATGVKGPEIKDALNRAKLSAIASI 390