Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., AAA family ATPase from Rhodanobacter sp000427505 FW510-R12

 Score =  128 bits (322), Expect = 3e-34
 Identities = 85/268 (31%), Positives = 133/268 (49%), Gaps = 5/268 (1%)

Query: 1   MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60
           MY  F+     PF + P+A  L+ S+ H+ A+ +L  G   G GF ++TG VGTGKT + 
Sbjct: 1   MYQAFYKLRGKPFQLTPDAGMLFPSKGHKRAMAYLLYGFEQGEGFVVITGAVGTGKTLLI 60

Query: 61  RAILASLPGKTRA-GMILNPTFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAEH 119
           + +   L  +  A   I +      ++L A+     + +  +   + L Q +   L++ H
Sbjct: 61  QKLFEELAHRNLAVASIASANLDGDDILPAVAAALALPFEGRGK-EALLQDVKRHLISLH 119

Query: 120 AQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQL 179
           A+    LL++DEAQ L P  LE LR+L+N E     LL+V L+GQ EL+  +    + QL
Sbjct: 120 ARQTHALLVVDEAQTLTPAALEMLRILSNFEFRGRALLQVFLVGQTELRRIIVSNHMEQL 179

Query: 180 AQRITGRYHLLPLNEEQTADYIRFRIEQASGN--PELFNRKACQWIAEQTHGIPRLINLV 237
            QRI   + L P++EE++  Y+  R+     N  PEL        +   + GIPR INLV
Sbjct: 180 RQRIIASHRLDPMSEEESRAYVLHRLHAVGWNDDPEL-APDVFTGVYLASGGIPRKINLV 238

Query: 238 CDAALKQAYQAGEPTLSLARIKLACQEV 265
            D  L   Y     +L    + +   E+
Sbjct: 239 MDRLLLHGYLEELHSLDQTELAIVLDEI 266