Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 24/246 (9%)

Query: 47  MLTGEVGTGKTTVARAILASLPGKTRAGMILNPTFSD--LELLEAICDEFEVSYPK-KAT 103
           +++G +G+GK+ + +A++AS   +    ++++   +     +L  +  E  V+ P+ +A 
Sbjct: 54  VVSGPLGSGKSLLRQALVASTNKQAVQSVVVSARSARDASSMLAQVAQELGVAQPEVQAI 113

Query: 104 LKKLTQVLHEFLLAEHAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIG 163
           L K+ Q+           G +V L++D+A+ L    L+ L  L     E      V L G
Sbjct: 114 LSKVVQLA--------LTGQEVYLLVDDAEQLDESALQALLELAAGVPEGRP--HVFLFG 163

Query: 164 QPELQEKLRLPQLRQLAQRITGRYHLL---PLNEEQTADYIRFRIEQASGNPELFNRKAC 220
           +P L   L    + +       R+H++   P +EE+T +Y+  R+E A    E+F+R+  
Sbjct: 164 EPSLIAGLDELNVEE------ERFHIIELAPYSEEETREYLEQRLEGAGRGIEVFSREQI 217

Query: 221 QWIAEQTHGIPRLINLVCDAALKQAYQAGEPTLSLARI--KLACQEVMSFQSSVYQVASA 278
             I E + G P  IN V    L +A  A   T     +  K+  + V++  + V    +A
Sbjct: 218 ADIHENSDGWPGNINQVARDTLIEAMIASRSTAKRPTMGFKMPKKHVLALSAVVVVAVAA 277

Query: 279 KPPVPK 284
              +PK
Sbjct: 278 AVLMPK 283