Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., Type II secretory pathway, component ExeA (predicted ATPase) from Enterobacter asburiae PDN3

 Score =  102 bits (254), Expect = 3e-26
 Identities = 106/518 (20%), Positives = 205/518 (39%), Gaps = 26/518 (5%)

Query: 1   MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60
           MY+  F F   PF  +      +    HQ+    L+      G  A+L+ +     + +A
Sbjct: 1   MYMRHFNFTTQPFRTITRMPGDFFVPYHQDVFGLLKEKCQTTGVTALLSDD-----SYLA 55

Query: 61  RAILASLPGKTRAGMILN--PTFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAE 118
                +L       + +N  P  S   LL  +    + S  +   +  + +   + +L+ 
Sbjct: 56  SQFCDALKKHDGTLLAINAFPKLSASGLLYKLNTTTKESKTRIQAIDAVLRQWKDEMLS- 114

Query: 119 HAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQ 178
             +  + +L+I   Q +  +  + L +L     E    L V+L+G  + +  L+   LR+
Sbjct: 115 -CKTTRKVLVISHIQSMKANCHDALSMLLTRAQELDVPLSVVLMGSADQEAALQQSGLRE 173

Query: 179 LAQRITGRYHLLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLINLVC 238
                   +   PL   ++  Y++ + E+   +   F R   + +   T G    +N + 
Sbjct: 174 FLHT---HHTFRPLTCRESLSYVQAQCEEHGSDATPFTRARVRKMHVLTKGQAGKLNELA 230

Query: 239 DAALKQAYQAGEPTLSLARIKLACQEVMSFQSSVYQVASAKPPVPKLSYLSSALGGIALA 298
             A+  A+      +S   ++LA  EV+           AKP   +L+ +   L    L 
Sbjct: 231 HLAMLAAWTERSAQVSPRHLRLAAGEVLP----------AKPKGKRLAVMG--LFASVLF 278

Query: 299 VVLAWQLPPQLDRVMQHYFPLPEVVPPTEQRVFPQALRSALLNATSSEHALETLYAVWGY 358
               W L P +   +    P+     P   +    A+        +   A+  LY +WGY
Sbjct: 279 AACGWTLMPTITARLPVQLPVMASWKPQAPKTDAPAVPVIDNEVVNKPDAMHQLYTMWGY 338

Query: 359 QASVLEQFCQTQADAVLWCEEQTGDWSTLQTYDLPAVLTLMMDDVPTYAVLYRLTGDQAE 418
            A++ E  CQ      L C+E +     L     P +  +   D   YAV+ R+  +  +
Sbjct: 339 DATMEEALCQNAGQVNLMCKEGSAPVEELAKEGYPWIGEIKTGDHLNYAVVARVDDNSLD 398

Query: 419 LLVGGERYRIARQWLEPLWNGQFSLLWQAS--FSRTLKQGMQGADVALLESKLAQVLGEP 476
           LL+    ++++R W      G ++ L + +      +       D+  ++ +L+  L  P
Sbjct: 399 LLMNNRTWQVSRSWFNQHATGNYTQLHRLTPQGKDAVSAESSAKDLGWMDQQLSLALNLP 458

Query: 477 ERPREQFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRL 514
           E   + +  +L ++   FQ+  ++HVDGIAG  TL +L
Sbjct: 459 ETHTKVWTAELMQRTREFQQKMHLHVDGIAGEDTLMQL 496