Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., general secretory pathway component, cryptic from Escherichia coli BL21

 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 8/304 (2%)

Query: 227 THGIPRLINLVCDAALKQAYQAGEPTLSLARIKLACQEVMSFQSSVYQVASAKPPVPKLS 286
           T  + + I L+C    ++   AGE    L + +            +Y++     P  +  
Sbjct: 180 TARVLKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFTAKQWRMIYRILGDNRP--RKM 237

Query: 287 YLSSALGGIALAVVLAWQLPPQLDRVMQHYFPLPEVVPPTEQRVFPQALRSALLNATSSE 346
            L+  + G  +A+   W L       +    P+P  + P    V     +          
Sbjct: 238 QLAVVMSGTIIALTCGWLLLSSFTATL----PVPAWLIPVTPVVKQDMTKDIAHVVMRDS 293

Query: 347 HALETLYAVWGYQASVLEQFCQTQADAVLWCEEQTGDWSTLQTYDLPAVLTLMMDDVPTY 406
            AL  LY VWGY+      +C     A L C+       TL   +LP + +L + D    
Sbjct: 294 EALSVLYGVWGYEVPADSAWCDQAVIAGLACKSGNASLQTLVDQNLPWIASLKVGDKKLP 353

Query: 407 AVLYRLTGDQAELLVGGERYRIARQWLEPLWNGQFSLLWQAS--FSRTLKQGMQGADVAL 464
            V+ R+     ++LVG + + +  +W E +W G + LLW+ S     T+ +     ++  
Sbjct: 354 VVVVRVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLWKMSPEGESTITRDSSEEEILW 413

Query: 465 LESKLAQVLGEPERPREQFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPS 524
           LE+ L + L     P  ++   L  K++ FQ+  ++  DG+ G  TL  L  +  + A  
Sbjct: 414 LETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHLWQVAGESAYL 473

Query: 525 LKEE 528
            ++E
Sbjct: 474 YRDE 477