Pairwise Alignments

Query, 256 a.a., general secretion pathway protein GspB from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., very large tegument protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 59/233 (25%), Positives = 89/233 (38%), Gaps = 38/233 (16%)

Query: 17  QAQPVSRRTYTEQEPTAMNPSRWLHLALWL---VPGLVTAGVMTYQRYELVQQEVANRQT 73
           +A+PV RR  T    TA   +  +   LW     PG   A           +  VA    
Sbjct: 34  KARPVRRRNRTGLAVTAAAVALLIAAGLWWWLGQPGTPNAPAPVSAAPPAAEPPVA---- 89

Query: 74  EPTTVQVDAPLERLAYPEFQDLQPTFVESGLDEPYPEEDVTALADNIVAPPATIQASGQQ 133
              T    AP   +A P  + +QP      ++ P P+    +      APPA   A+   
Sbjct: 90  -VVTAPPPAPAPSVAAPAPEPVQPILAPPRVETPPPKRPAAS------APPAPAPAAEPA 142

Query: 134 SASNKALGDLDLTQLSPELALRVQAIMRDQSSEPATPSTPTSAAV---SLTQHSDRYQGQ 190
            A+  A                       +++ PA P+ P + A    S  + S   + Q
Sbjct: 143 PAAPTAPA---------------------KAAAPAAPAAPEANAAPVRSFAELSPEARAQ 181

Query: 191 LPALNFQMHAFSSNEQKRWIKVNGVEYREGDMLTPEVKLESIKPQSSVIIFGG 243
           LPA+N     +S N   R + VNG   +EG  + P  KLE+I  +S+V+   G
Sbjct: 182 LPAVNVSGSTYSKNPALRMLIVNGKVLQEGQEIAPGFKLETIGQRSAVLNHNG 234