Pairwise Alignments

Query, 256 a.a., general secretion pathway protein GspB from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., type II secretion system assembly factor GspB from Dickeya dianthicola ME23

 Score = 59.7 bits (143), Expect = 5e-14
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 21/148 (14%)

Query: 109 PEEDVTALADNIVAPPATIQASGQQSASNKALGDLDLTQLSPELALRVQAIMRDQSSEPA 168
           P   + A    IVAP  T  A    S+ ++++ D   T  SP       A   D+S +PA
Sbjct: 51  PAAAIAAPPGKIVAP--TTGAEATTSSPSQSIADNRETAASPA------ATAEDKSPKPA 102

Query: 169 TPSTPTSAAVSLTQHSDRYQGQLPALNFQMHAFSSNEQKRWIKVNGVEYREGDMLTPEVK 228
              T  +             G+LP + F  H ++S+  KR + +NG  YREGD     + 
Sbjct: 103 AWQTAKA-------------GELPYVAFSAHVYTSDPDKRSVTLNGERYREGDSPYQGLV 149

Query: 229 LESIKPQSSVIIFGGEEIEIPALYDWKG 256
           +E I+    +  F GE   + +L DW G
Sbjct: 150 IEQIEQDMVIFSFNGEPFILDSLQDWPG 177