Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  227 bits (578), Expect = 9e-64
 Identities = 134/346 (38%), Positives = 205/346 (59%)

Query: 88  TLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKDEYGDVARELEKT 147
           TLL ++V V+  L   R + R  Q    V++ +A  +LS  I++  +DE G + + +++ 
Sbjct: 294 TLLALLVGVIAALVITRQITRPIQETLAVVERIASGDLSHNIQVTRRDELGVLQQGIQRM 353

Query: 148 RRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTV 207
              L++LI    D   ++ S  E ++    +T      +  E DQ+ATAM EM++TVQ V
Sbjct: 354 GTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTATVQEV 413

Query: 208 AEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVV 267
           A +A+ AS    +A  QA+ G + V   I+++  L+ +++ S  A+  +++    I SV+
Sbjct: 414 ARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKIGSVM 473

Query: 268 GTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQ 327
             I++++EQTNLLALNAAIEAARAGEAGRGFAVVADEVR LAQRTQ +T EI+ +++ LQ
Sbjct: 474 DVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQ 533

Query: 328 SSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAE 387
           +      N+M  S       VEL   AG  L+ I   V  +  MN QIAAAA QQS VAE
Sbjct: 534 NGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQSAVAE 593

Query: 388 EMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           E++ ++ NVR++ E + T   E  ++S  +     +L + ++ FRV
Sbjct: 594 EISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHFRV 639