Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  216 bits (549), Expect = 2e-60
 Identities = 133/377 (35%), Positives = 209/377 (55%), Gaps = 3/377 (0%)

Query: 57  DIFYQSLLAATNSVEVAQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDV 116
           DI  +  LA     E       N +V +     LL ++F  LL  +  + + Q    ++ 
Sbjct: 168 DINNKMALATNKDAEDQYNMAFNMVVSLLVIATLLTLLFAWLLTRSITLPIAQALEAAEE 227

Query: 117 IKLMAQRNLSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSM 176
           +   A+ NL+ PIK+D  DE G +   + K + +L+D ++    ++ +L S  E +    
Sbjct: 228 V---AEGNLTRPIKVDGSDEAGRLLAAMAKMQDKLRDTLQRIAGSATQLASAAEELNAVT 284

Query: 177 SETKDSAQEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTI 236
            E+     ++ NEI+Q ATA++EM+S V+ VA +A + S  + NA+  A  G+  V+ T+
Sbjct: 285 DESARGLTQQNNEIEQAATAVNEMTSAVEEVARNAVSTSEASRNATTSAGDGRDLVQETV 344

Query: 237 SKMSELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGR 296
           S +  +S D+ ++A  +  +      I  V+  IR +++QTNLLALNAAIEAARAGEAGR
Sbjct: 345 SAIERMSGDVQATATLIGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGR 404

Query: 297 GFAVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGS 356
           GFAVVADEVR LA RTQ +T EI+ MI  +Q+    AV+ M  S  +A   + +   AG 
Sbjct: 405 GFAVVADEVRALAHRTQQSTSEIERMIGSIQAGTEHAVDSMRNSTERAESTLNIAKGAGM 464

Query: 357 ELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEI 416
            LD I   +  +N+ N  IA+AA +Q+ VA E++ NL N+R+L   S T  ++    S  
Sbjct: 465 SLDTINTAIVEINERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGASQTSAASSE 524

Query: 417 MQSNAEELDRKITAFRV 433
           +   A +L+  +  FR+
Sbjct: 525 LSRLAVDLNGMVGRFRL 541