Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  203 bits (516), Expect = 1e-56
 Identities = 122/359 (33%), Positives = 203/359 (56%)

Query: 73  AQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSEPIKMD 132
           A Q YD  +  V   ++   ++ V+L     R ++   +   +V + +A  NLS+ I+ D
Sbjct: 181 AGQSYDGAITGVIAVSVAAALLTVLLAWLLTRSIVTPLRKAVEVAETIAGGNLSKAIEDD 240

Query: 133 CKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQ 192
            KDE   +   L   +  L+  I+    ++ +L S  E ++    E     Q++ NEIDQ
Sbjct: 241 GKDEPARLLGALATMQANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEIDQ 300

Query: 193 LATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQA 252
            ATA++EM++ V+ VA +A + S  +  ++Q A+ G+  V  T+  +  +++D+ ++A  
Sbjct: 301 AATAVNEMTAAVEEVARNAVSTSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAM 360

Query: 253 VNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRT 312
           +  +  +   I  V+  IR+I+EQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RT
Sbjct: 361 IEGLATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420

Query: 313 QNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMN 372
             +T EI++M++ +Q+    AV  M++S  +    +E+   AG  L+ I   + L+N+ N
Sbjct: 421 AQSTQEIEKMVAGIQNGTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISLINERN 480

Query: 373 FQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAF 431
             IA+A+ +Q+ V+ E++ NL N+R+L   S     +    S  +   A +L+  +  F
Sbjct: 481 LVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVARF 539