Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  210 bits (535), Expect = 8e-59
 Identities = 131/364 (35%), Positives = 214/364 (58%), Gaps = 6/364 (1%)

Query: 74  QQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMA--QRNLSEPIKM 131
           Q+  +  L+ +    ++L++V   + +  A  +LR    +   +  +A  + +L+  + +
Sbjct: 198 QKRMEGVLLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLAI 257

Query: 132 DCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEID 191
             +DE GD+A    +   ++  L++   + + +LT L   ++     ++ + + + +E D
Sbjct: 258 TSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETD 317

Query: 192 QLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQ 251
           Q+ATA+++MSS  Q VA  AQ AS   +    + Q  ++ V  +I+++  L  DI SS  
Sbjct: 318 QVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSSGV 377

Query: 252 AVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQR 311
           +++ +++ V +I SV+  IRSI+EQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA R
Sbjct: 378 SLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASR 437

Query: 312 TQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITN-AGSELDGIVNQVQLLND 370
           TQ +T EIQ MI +LQ+   +AV  M +S   A DG     N AG+ LD +   +  +N 
Sbjct: 438 TQTSTQEIQGMIDRLQTGTEAAVEAMRRS-SDAGDGTSAQANEAGASLDTMAQLIGTINS 496

Query: 371 MNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTEL-LETSEIMQSNAEELDRKIT 429
           MN QIA+AA +Q+ VAEE+N +++ +   V+ SV   T+L  +TS  +    + L + + 
Sbjct: 497 MNAQIASAAEEQTAVAEEINRSVHQIAVAVD-SVADETQLGAQTSRSLAELGQRLGQLVG 555

Query: 430 AFRV 433
            FR+
Sbjct: 556 QFRI 559