Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  214 bits (545), Expect = 5e-60
 Identities = 138/371 (37%), Positives = 210/371 (56%), Gaps = 6/371 (1%)

Query: 60  YQSLLAATNSV-EVAQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVIK 118
           Y ++LA   S+ +V ++ + NY V V    L+L++  +       R +L Q   L DV+ 
Sbjct: 122 YIAVLAYAPSLSQVFEERFANYAVAV----LILMLAMLGASQLLIRFLLSQLNTLKDVML 177

Query: 119 LMAQR-NLSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMS 177
            + +  +LS  + + CKDE G +A      +   Q ++      +++L      +  SM+
Sbjct: 178 HVEKTGDLSARVPLACKDEVGQMASAFNAMQAGYQRVVNTVAHTARQLDDGAARLASSMN 237

Query: 178 ETKDSAQEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTIS 237
           E +     + +E DQ ATA++EM++TV  +A+HA     L++ A   A +GQ+ V     
Sbjct: 238 EVQHGMLGQQSETDQAATAINEMTATVHHIAQHAGATRDLSQTADTLAGSGQEVVTRVQR 297

Query: 238 KMSELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRG 297
            ++ LS  +  +A  + ++ E    I+ VV  I SI+EQTNLLALNAAIEAARAGE GRG
Sbjct: 298 SIAGLSTGVQQTAVMIQKLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRG 357

Query: 298 FAVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSE 357
           FAVVADEVRNLA+R Q++T EI  M+S LQ+    AV+ M++S  +A D V     AG+ 
Sbjct: 358 FAVVADEVRNLAKRVQSSTDEITRMVSALQAGTRDAVDFMQESSFKADDCVHQAQEAGAA 417

Query: 358 LDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIM 417
           L  I   V  + + N QIA AA QQS+VAEEMN  + ++R++ E +V    +   TS  +
Sbjct: 418 LAEITGAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVQQTVDSATTSNQL 477

Query: 418 QSNAEELDRKI 428
            + A EL + I
Sbjct: 478 ATLAGELSKAI 488