Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  198 bits (503), Expect = 6e-55
 Identities = 124/358 (34%), Positives = 203/358 (56%), Gaps = 11/358 (3%)

Query: 83  QVFWQTLLLIVVFVVLLLFAARVM-------LRQTQYLSDVIKLMAQRNLSEPIKMDCKD 135
           ++  + L+ IV+  V+   AA ++       +R +  +S + ++    +L+  +     D
Sbjct: 415 ELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDS--ISQIQRMSRDNDLTVRLSEQGSD 472

Query: 136 EYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLAT 195
           E   +A+ L +    LQD I      + +L S T+ +T +M+ T++S  E+    D + T
Sbjct: 473 EIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVT 532

Query: 196 AMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQ 255
           A++EMS+++  V+E AQ A++  + A+Q+   G          M+ +++ ++S+ +A+ +
Sbjct: 533 AVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIAR 592

Query: 256 VEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNA 315
           +     +I+SV+  I++I+EQTNLLALNAAIEAARAGE GRGFAVVADEVRNLA +TQ +
Sbjct: 593 LNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTS 652

Query: 316 TVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQI 375
           T EI+  I +LQ    S VN +E++      GV    +    L  IV+ +  LN+MN QI
Sbjct: 653 TEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQI 712

Query: 376 AAAAGQQSNVAEEMNENLNNVRELVEGSVTVMT-ELLETSEIMQSNAEELDRKITAFR 432
           A A  QQ  V EE+N N+ ++ + V  SVTV   E+      +   A EL +++  FR
Sbjct: 713 ATATEQQRGVTEEINANITSISD-VSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769