Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  212 bits (539), Expect = 3e-59
 Identities = 132/365 (36%), Positives = 201/365 (55%), Gaps = 2/365 (0%)

Query: 71  EVAQQHYDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMA--QRNLSEP 128
           E+A    D         T++ +V+ V +LLF  RV+++    L+D I+ +A  + +L++ 
Sbjct: 260 EIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQNVASGEGDLTQR 319

Query: 129 IKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFN 188
           +  +  +E+  +A         LQ  +        E+   +E  +M++ ++ ++ + + +
Sbjct: 320 LSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRSQLH 379

Query: 189 EIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISS 248
           E++QLATAM EM++T   VA +AQ A+S  + A   A  G   V  T   +  LS  I +
Sbjct: 380 ELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDA 439

Query: 249 SAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNL 308
           +   V  +E     I +V+  I  I++QTNLLALNAAIEAARAGE+GRGFAVVADEVR L
Sbjct: 440 AVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTL 499

Query: 309 AQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLL 368
           AQRTQ +T EI+ MI +LQS AN+    M  S   AA  V     A   L+ I   +Q +
Sbjct: 500 AQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQI 559

Query: 369 NDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKI 428
           +DMN QIA+AA +QS VAEE+N N   +++L +       E   + +I   N  E D  +
Sbjct: 560 SDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQIQTENIREQDAIL 619

Query: 429 TAFRV 433
             F+V
Sbjct: 620 NKFKV 624