Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  198 bits (504), Expect = 4e-55
 Identities = 115/347 (33%), Positives = 203/347 (58%), Gaps = 2/347 (0%)

Query: 89  LLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRN--LSEPIKMDCKDEYGDVARELEK 146
           ++LI + V +++F    + +    L   +  +AQ +  L+  ++++  D+   ++    +
Sbjct: 296 IVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNR 355

Query: 147 TRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQT 206
               LQ+++    DA+Q ++S  E ++ +  E +       +E DQ+ TA+++MS + +T
Sbjct: 356 FSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESART 415

Query: 207 VAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSV 266
           VAE    ++ +TE AS++AQ     V + +S ++ L  D+ + +++++ +      IS V
Sbjct: 416 VAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEV 475

Query: 267 VGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQL 326
           +  I +ISEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQN+T EI +M+++L
Sbjct: 476 LSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKL 535

Query: 327 QSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVA 386
               +S V  ME++  Q     +  +     L+ +   V  ++D++ QIAAA  QQS VA
Sbjct: 536 LEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVA 595

Query: 387 EEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
            E++ N+ ++RE+VE  V    + +  +E +  +  EL++ +  F++
Sbjct: 596 AELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642