Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  242 bits (617), Expect = 2e-68
 Identities = 143/357 (40%), Positives = 219/357 (61%), Gaps = 1/357 (0%)

Query: 77  YDNYLVQVFWQTLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKDE 136
           Y  +L   F  TL++ +V + L +  +R +++    + DV+K +AQ +L+  I +  KDE
Sbjct: 181 YQQFLRMGF-ATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDE 239

Query: 137 YGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATA 196
            G VA+ +  +   + D +   + ++  +      +  S  ET  +   + +++ QLATA
Sbjct: 240 LGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATA 299

Query: 197 MSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQV 256
           M++M++TV  VA HA++ +  T +AS++A  G + V S++  +  LS ++  +   VN++
Sbjct: 300 MNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKL 359

Query: 257 EERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNAT 316
           +E V+ IS V   I  ISEQTNLLALNAAIEAARAG+ GRGFAVVADEVRNLA RT ++T
Sbjct: 360 KEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHST 419

Query: 317 VEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIA 376
            EIQ MI++LQ  A S  + M+KS   AA+ V    NAGS+L  IVN +Q ++D   QIA
Sbjct: 420 DEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIA 479

Query: 377 AAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
            AA +QS VAEEMN N++ + +         T L E SE +   + +LD+K+TAF++
Sbjct: 480 TAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536