Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  200 bits (509), Expect = 8e-56
 Identities = 127/344 (36%), Positives = 204/344 (59%), Gaps = 10/344 (2%)

Query: 91  LIVVFVVLLLFAARVMLRQTQYLSDVI---KLMAQRNLSEPIKMDCKDEYGDVARELEKT 147
           +++ F+V ++    +    T+ L+  +   + +A  +L++PI     DE G +   L   
Sbjct: 225 VVIAFLVAIMLGVLITRMITRPLAVAVASAQRIAGGDLTQPIVSTSGDEAGQLLNALSDM 284

Query: 148 RRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTV 207
           +  L++ I+    AS +L S  E ++    E+      + +EI Q ATA+++M++ V+ V
Sbjct: 285 QGGLKNTIQQIASASDQLASAAEELSAVTDESTRGLTRQNDEIQQAATAVNQMTAAVEEV 344

Query: 208 AEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVV 267
           A +A + S  +++A+  A  G+  V  T+  ++ +  +I++S  AV+++   V  IS V+
Sbjct: 345 ARNAVSTSEASKSATDDAVDGRGQVDHTVKGITTMVHEITASTGAVSELAGHVREISKVL 404

Query: 268 GTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQ 327
             IRSI+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ +TVEI+ MIS +Q
Sbjct: 405 DVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQASTVEIEGMISTVQ 464

Query: 328 SSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAE 387
           S A+ AV  M KS+  A +  EL   AG+ L+ I   V  +N+ N  IA+A+ +Q+ VA 
Sbjct: 465 SGADGAVAAMGKSLSLATNTQELALRAGAALEKITLGVATINERNLVIASASEEQAQVAR 524

Query: 388 EMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAF 431
           E++ NL N+++L        T+    +    ++++EL R  T+F
Sbjct: 525 EVDRNLINIQDL-------STQSAAGANQTSASSQELSRLATSF 561