Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Methyl-accepting chemotaxis protein McpQ from Pseudomonas lactucae CFBP13502

 Score =  210 bits (534), Expect = 1e-58
 Identities = 135/351 (38%), Positives = 196/351 (55%), Gaps = 6/351 (1%)

Query: 89  LLLIVVFVVLL--LFAARVMLRQT----QYLSDVIKLMAQRNLSEPIKMDCKDEYGDVAR 142
           LLLI   + L+  L AA  + RQ          V + +A  +LS  +    +DE G + R
Sbjct: 288 LLLIATILALIFGLVAAWAITRQIIIPLNQTLQVAERVASGDLSHNLTSLRQDELGQLQR 347

Query: 143 ELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSS 202
            ++     L++LI    +   ++ S  E ++    +T      +  E DQ+ATAM+EM++
Sbjct: 348 AMQSMTLGLRELIGGISEGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAA 407

Query: 203 TVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVA 262
           TVQ VA +A+ AS     A QQA+ G + V   I+++  L+ ++ +S  A+  ++     
Sbjct: 408 TVQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTAAMGDLKRESDK 467

Query: 263 ISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEM 322
           I SV+  I+S+++QTNLLALNAAIEAARAGEAGRGFAVVADEVR+LAQRTQ +T EI E+
Sbjct: 468 IGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIAEL 527

Query: 323 ISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQ 382
           I  LQ+       +M+ S       VEL   AGS L+ I   V  +  MN QIA AA QQ
Sbjct: 528 IVGLQNGTQQVATIMDNSRGLTDSSVELTRRAGSALENITRTVSTIQAMNSQIATAAEQQ 587

Query: 383 SNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           S VAEE+N ++ NVR++ E +     E   +S  +      L   +  FR+
Sbjct: 588 SAVAEEINRSVLNVRDVSEQTSAASEETAASSAELARLGNYLQTLVGRFRI 638