Pairwise Alignments

Query, 476 a.a., bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., ribokinase from Pseudomonas simiae WCS417

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 65/256 (25%), Positives = 100/256 (39%), Gaps = 11/256 (4%)

Query: 50  PGG-AANVAMNIASLGGHAHIIGLTGQDEPANVLANKLTSLKVHCDFVALPDYPTITKLR 108
           PGG  AN A+  A LG    +IG  G D   + L   L    + C  V+  D  +   L 
Sbjct: 38  PGGKGANQAVASARLGADVSMIGCVGSDAYGSQLREALLVEGIDCQAVSTVDGSSGVALI 97

Query: 109 VLS-RGQQLIRLDFEDKFENTDAQLILSRMESALPKVRAVILSDYAKGALEHVQQFIQKA 167
           V+    Q  I +      E T A L     ++ L     ++     +  +  V   +++ 
Sbjct: 98  VVDDSSQNAIVIVAGSNGELTPASL--QAFDAVLQAADVIVCQ--LEVPMNTVGYALKRG 153

Query: 168 KAAGVPVFIDPKGSD----FERYRGASLLTPNMSEFEAVVGKVKSEQELVEKGFALIEKF 223
           +  G  V ++P  +      E Y     L PN SE  A+ G      +  +     + + 
Sbjct: 154 RELGKTVILNPAPASGPLPAEWYASIDYLIPNESEASALSGVTVDSIDAAKVAATQLIQA 213

Query: 224 DLGALLVTRSEHGMTLLRRGLEPFHLPTQAKEVYDVTGAGDTVISVLAASVAAGKALDEA 283
             G ++VT    G  L   G    HL     +  D T AGDT +   AA++A GK+  EA
Sbjct: 214 GAGKVIVTLGAQG-ALFTDGQRFEHLQAPKVKAVDTTAAGDTFVGGFAAALANGKSEAEA 272

Query: 284 CALANAAAGVVVGKLG 299
                 AA + V + G
Sbjct: 273 IRFGQVAAALSVTRAG 288



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 28/220 (12%)

Query: 262 AGDTVISVLAASVAAGKALDEACALANAAAGV-VVGKLGTSTVSTIELAEA--------- 311
           AG+T+I    ++V  GK  ++A A A   A V ++G +G+    + +L EA         
Sbjct: 25  AGETLIGQTFSTVPGGKGANQAVASARLGADVSMIGCVGSDAYGS-QLREALLVEGIDCQ 83

Query: 312 ----VHGSKDTDYGVISEDALIEAVKKAQARGEKVVMTNGCFDILHAGHVSYLNHAAELG 367
               V GS      V+ + +    V  A + GE    +   FD       + L  A  + 
Sbjct: 84  AVSTVDGSSGVALIVVDDSSQNAIVIVAGSNGELTPASLQAFD-------AVLQAADVIV 136

Query: 368 DRLIVAVNT-DESVKRLKGPGRPVNSTDRRMAVLAGLGAVDWVVPFSEDTPQRLIAAVLP 426
            +L V +NT   ++KR +  G+ V       A  +G    +W        P    A+ L 
Sbjct: 137 CQLEVPMNTVGYALKRGRELGKTVILNP---APASGPLPAEWYASIDYLIPNESEASALS 193

Query: 427 NLLVKGGDYKPEDIAGGKEVIAAGGEVKVLNFEEGCSTTE 466
            + V   D     +A  + + A  G+V V    +G   T+
Sbjct: 194 GVTVDSID--AAKVAATQLIQAGAGKVIVTLGAQGALFTD 231