Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., peptidase from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 1e-48
 Identities = 126/436 (28%), Positives = 213/436 (48%), Gaps = 21/436 (4%)

Query: 11  AALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGY 70
           A L T +SA  A    ++Y QA  NDP  L    +RDA  E     R+ LLP+  L+  Y
Sbjct: 7   ALLLTSASAQAAMGPFDVYEQALRNDPVFLGAIKERDAGLENRAIGRAGLLPR--LSYNY 64

Query: 71  NINRSDQAPRESD-----------LLSAGINFS--QELYQRSSWVSLDTAEKKARQADSQ 117
           N  R++      D             S G  FS  Q L+   ++ +      +A  AD  
Sbjct: 65  NKGRNNSQATLPDGRGGNYHDDRNYNSYGSTFSLQQPLFDYEAYANYRKGVAQALFADES 124

Query: 118 YAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDA 177
           +    Q L++RV   Y + L AQD ++  RA+K A  +Q +Q +  F+ G    TD+ +A
Sbjct: 125 FRDKSQALLVRVLTYYTQALFAQDQIDIARAKKKAFEQQFQQNQHLFQQGEGTRTDILEA 184

Query: 178 QAQFDGVLADEVLAENSLTNSYEALREITGQE---YSKLAVLDTKRFAASRTTESSEALI 234
           +++++   A+E+ A +    S   L  + G +      LA L+    A + T  + +   
Sbjct: 185 ESRYELATAEEIQALDEQDASLRELGALIGVQSVNIHDLAPLNQGFAAFTLTPANYDTWH 244

Query: 235 EKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYN 294
           E A   N +L + R + +VAR  +    +GHLP +T    Y        ++ NT  + Y+
Sbjct: 245 ELAISNNPTLASQRQALEVARYEVERNRAGHLPKVT---AYASSRQQESDSGNTYNQRYD 301

Query: 295 DFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGA 354
              IGV + +PLY GG  ++ T+QA  A   A  +LE   R  + ++R   +   + +  
Sbjct: 302 TNTIGVEVSLPLYAGGGISASTRQASRAMEQAEYELEGKTRETLIELRRQFSACLSGVSK 361

Query: 355 LRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQL 414
           LRAY++A++SA++ + +T+     G R  +D L+A ++LY   ++L+ ARYDY+++  +L
Sbjct: 362 LRAYQKALVSAEALVVSTQQSILGGERVNLDALNAEQQLYSTRRDLAQARYDYLMAWTKL 421

Query: 415 RQAIGTLSEQDVMDVN 430
               G L + D+  V+
Sbjct: 422 HYYAGNLRDTDLAKVD 437