Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., agglutination protein from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (266), Expect = 1e-27
 Identities = 99/436 (22%), Positives = 197/436 (45%), Gaps = 19/436 (4%)

Query: 3   KLLPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLP 62
           K LPL   A    LS+ V A+ L +  +    ++P+L S   Q  +      +S  A LP
Sbjct: 10  KGLPLKAIALAIALSNPVSAQTLEQAVSITLASNPELKSAFNQFKSREYDAEASSGAYLP 69

Query: 63  QINLTAGYNINRSDQAP----RESDLL--SAGINFSQELYQRSSWVSLDTAEKKARQADS 116
           +I+L AG      + A     R +DL    A +  +Q ++  S+  +L+  ++ A +A++
Sbjct: 70  KIDLDAGIGYEAINPAESSGNRNTDLTRKDATLTLTQLIWDGSA--TLNDMDRTAAEAEA 127

Query: 117 ---QYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITD 173
              Q  A    + L VAK Y +  +A + L       A         K+R + G+ +  D
Sbjct: 128 DRYQLLADASNMALEVAKIYLDATKASEILTLSENNLAIHKDIYRDIKKRADSGIGSTAD 187

Query: 174 VHDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEAL 233
           V   +A+     ++ V A+N+L + Y   R + GQE   L      + A   T E++   
Sbjct: 188 VTQVEARLAKAHSNLVAAQNNLFDIYTQFRRLVGQEPVSLEFPRADQNAIPPTLENA--- 244

Query: 234 IEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEY 293
           +  AQ+ +  +  A+   D AR     + + + P+L+ +   ++ N++     ++     
Sbjct: 245 LNMAQENHPVIKVAQADVDAARFQYKQSKAPNYPTLSFEAAQSWRNDAGGIEGSS----- 299

Query: 294 NDFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIG 353
           ++    + L+  LY GG+ +  T+ A +    +    E  +R+V + +R   + ++ ++ 
Sbjct: 300 DELSAMLRLRYNLYNGGSDSDRTESAAYQLNRSKDLREKTFRTVEEGLRLSWSALDLTLQ 359

Query: 354 ALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQ 413
             +     V SA   + +    + +G RT++D+L+    L++A K+  +ARY    +  +
Sbjct: 360 QKQFLADHVDSASKTVVSYRKQYQIGQRTLLDLLNTENELFEARKDYLDARYAEQYAKYR 419

Query: 414 LRQAIGTLSEQDVMDV 429
           +  A G L +   +D+
Sbjct: 420 VMNASGNLLDALRVDI 435