Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., Agglutination protein from Pseudomonas putida KT2440

 Score = 94.7 bits (234), Expect = 5e-24
 Identities = 98/437 (22%), Positives = 179/437 (40%), Gaps = 29/437 (6%)

Query: 1   MKKLLPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSAL 60
           M+ L P+  +  L   S+ V A ++ E    A +  PQ+ S    + +A E V  +R   
Sbjct: 1   MRVLNPITSALLLALASANVQAMSITEAVQSAVDYHPQVSSNRNSKLSADEDVKFARGGY 60

Query: 61  LPQINLTAGYNINRSDQAP--RESDLLSAGINFSQ----------ELYQRSSWVSLDTAE 108
            P ++L AGY   RSD A    E +     +N++Q          + +  S+ V    A 
Sbjct: 61  YPSVDLVAGYGRQRSDNATTRAEGNHNKETLNYTQSELRLRQMIFDGFNTSNEVGRTEAV 120

Query: 109 KKARQADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGL 168
             +R   +Q  A  Q + LR  + Y EVL+ ++ +   +    A  R  +Q   R E G+
Sbjct: 121 STSRAYYTQ--AVAQDVALRAVEVYLEVLKRRELVTLAKNNLQAHLRVNDQIGLRNERGV 178

Query: 169 SAITDVHDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLA----VLDTKRFAAS 224
            +  D+  ++A+         LAEN+L  +   L +     +S +      L++ +    
Sbjct: 179 GSTADLDQSRAR-------RALAENNLDTAEVDLADAEANFFSVIGRAPDELESPQSIKG 231

Query: 225 RTTESSEALIEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDN 284
               + E   +  +Q N  + +A+   + A     +  S   P             +N+N
Sbjct: 232 EVPGTLEEARDGMRQNNPYIKSAQADVNAAEKQYEVGKSTFYPRFDA----ILATGANNN 287

Query: 285 AKNTSGEEYNDFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAY 344
                G   ND++ GV +   L+ GG+  +  +        A      A R + +++   
Sbjct: 288 TGGEKGHNNNDWQAGVEMNYNLFRGGSDKARLQSDAHKINQALDIRNNALRELTENLSLA 347

Query: 345 NNNINASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNAR 404
            N +N +   L    +   + K    A +  F +G RT++DVLD+   LY+A++  +  R
Sbjct: 348 WNAMNNASKQLPTAREYAETTKRVRAAYQDQFGLGQRTLLDVLDSENELYNADRRYTEVR 407

Query: 405 YDYILSVLQLRQAIGTL 421
           Y    S  ++   +G L
Sbjct: 408 YTEEFSRYRVLATMGEL 424