Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  165 bits (417), Expect = 3e-45
 Identities = 114/420 (27%), Positives = 204/420 (48%), Gaps = 5/420 (1%)

Query: 16  LSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGYN-INR 74
           +S++ +  +LA +Y +A+  DP++L+  A+  +A E   ++  +LLPQ++  A  + I R
Sbjct: 35  VSASTYVLDLAGLYREARLEDPRVLAAYARARSASEQQRAALGSLLPQVSANANSSRILR 94

Query: 75  SDQAPRES-DLLSAGINFSQELYQRSSWVSLDTAEKKARQADSQYAATQQGLILRVAKAY 133
            ++A R+  +  +  ++ +Q LY + +W     ++    Q   +   T     + +AK Y
Sbjct: 95  KNEAERDLYNTETYSLSLTQYLYNKPAWERYQKSKSVKDQKGHEAEDTLAEATVDLAKRY 154

Query: 134 FEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQFDGVLADEVLAEN 193
           F  L A D L  V+AE+ A  + L++    FE  ++ ITD  D QA+ D +LA EV A N
Sbjct: 155 FVALAADDELALVQAERRATQKNLDRVSSMFERQMAKITDKLDMQARVDFLLAQEVEARN 214

Query: 194 SLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQNLSLLAARISQDV 253
            +  S EAL EI G+  ++         A    T   +  + +A + N  L + +   + 
Sbjct: 215 QVQVSREALAEIVGRPITEPLSRVRNDVALQAPTRPLQNWVTQAVENNPLLKSYQSGAEA 274

Query: 254 ARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGVNLKVPLYTGGNTT 313
           A   +      H P L+L       +   D   NT     + +     +K+P+Y+GG+T+
Sbjct: 275 ANAAVREGKGEHYPQLSLSLSAQQNDQGYD---NTQAPRSDSYVASFGVKIPIYSGGSTS 331

Query: 314 SLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQAVISAKSALEATE 373
           +  +      +AA + LE   R VVK+         A++  +RA   A+ SA+ +  A +
Sbjct: 332 ARVRGLYDDQLAAEEQLEGVRRQVVKETTTAYLTAQAAVEKIRANRNALSSAQHSSVAAQ 391

Query: 374 AGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGTLSEQDVMDVNAGL 433
             F  G    VDVL A +  + A ++L   +YD+I ++  L +  G L+++ V +VN  L
Sbjct: 392 KAFTFGVVNAVDVLTAVQNEFKARRDLLKTQYDFITNLFLLNRWAGELNQESVDNVNVWL 451