Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., Outer membrane protein TolC from Pseudomonas lactucae CFBP13502

 Score =  261 bits (666), Expect = 4e-74
 Identities = 166/455 (36%), Positives = 252/455 (55%), Gaps = 23/455 (5%)

Query: 1   MKKLLPLFVSAALGTLSSAVWAE--------NLAEIYNQAKENDPQLLSVAAQRDAAFEA 52
           M + L L V+ +  T +  VWA         +L  +Y +A +N+  L +  AQ  A  E 
Sbjct: 1   MLRKLSLAVAVSCAT-NGMVWAAEAPLSARTDLVSVYQEAVDNNADLAAARAQYGAQKEV 59

Query: 53  VTSSRSALLPQINLTAGYNINR------SDQAPRESDLLSAGINFSQELYQRSSWVSLDT 106
           V  +R+ LLP  NL+ G +IN       +  A    D  S     SQ L++   W  L  
Sbjct: 60  VPQARAGLLP--NLSGGADINNVRTQIDTPAATANRDAHSWRATLSQPLFRADRWFQLQA 117

Query: 107 AEKKARQADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEV 166
           AE    QA  Q +AT+Q LIL+ A+ YF VLRAQDNL   +AE+ A  RQL+Q+ +RF+V
Sbjct: 118 AEAVNEQAALQLSATEQNLILQSAENYFAVLRAQDNLASTKAEENAFKRQLDQSNERFDV 177

Query: 167 GLSAITDVHDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRT 226
           GLS  TDV  +QA +D   A+ +LA+  + +++EAL  +T ++Y+ +  +          
Sbjct: 178 GLSDKTDVLQSQASYDTARANRILAQRQVEDAFEALITLTNRQYNSIQGIVHTLPVLPPL 237

Query: 227 TESSEALIEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNN-----S 281
              ++A +E A +QNL+LLA+  +   A + +    +GH P+L     Y  G+N     S
Sbjct: 238 PNDAKAWVETAGRQNLNLLASNYAVTAAEETLKQRKAGHAPTLDAVAQYEKGDNDALGFS 297

Query: 282 NDNAKNTSGE-EYNDFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKD 340
           N NA  T    +     IG+ L +P+Y+GG T+S  +++        Q  E   R VV++
Sbjct: 298 NPNAFGTPYRGDVEQRTIGLRLSIPIYSGGLTSSQVRESYSRLGQTEQQREGLRRQVVEN 357

Query: 341 VRAYNNNINASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNL 400
            R  +  +N  +  ++A  Q++IS +SA+EATE G+ VGTR IVDVLD+ R+LY + +N 
Sbjct: 358 TRNLHRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDSQRQLYASVRNY 417

Query: 401 SNARYDYILSVLQLRQAIGTLSEQDVMDVNAGLKV 435
           +N+RYDYIL  L+L+QA GTL+  D+ D+   LKV
Sbjct: 418 NNSRYDYILDNLRLKQAAGTLNPGDLQDLARYLKV 452