Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., TolC family outer membrane protein from Pectobacterium carotovorum WPP14

 Score =  165 bits (418), Expect = 2e-45
 Identities = 118/430 (27%), Positives = 211/430 (49%), Gaps = 18/430 (4%)

Query: 5   LPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQI 64
           +PLF++      S A+    L E + QA  +DP   +    R+A  E     R+ LLP++
Sbjct: 18  IPLFLTLIYSAPSQAL---GLMEAWQQALTHDPAFQAAVHARNADSEEKNIGRAGLLPKV 74

Query: 65  NLTAGYNINRSD--------QAPRESDLLSAGINFSQELYQRSSWVSLDTAEKKARQADS 116
             T  Y+ +R+D        Q+ R+    ++  +  Q L   ++W      E  A  AD 
Sbjct: 75  --TYDYSQSRNDSTVTAGGQQSERDYTSRASSFSLQQPLIDYAAWSRYQQGEASAVLADE 132

Query: 117 QYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHD 176
           Q     Q L++R+ +AY  VL +++ +  V+A++ A   Q +  ++ F+ G    TD+ +
Sbjct: 133 QLRDASQQLLVRLFQAYTNVLFSREQIALVQAQQRAYREQYQLNQRLFQQGEGTRTDMLE 192

Query: 177 AQAQFDGVLADEVLAENSLTNSYEALREITGQEYS--KLAVLDTKRFAASRTTESSEALI 234
            +A+ +   A  + A+++L  S   L  + G      +LA L  +    +      +   
Sbjct: 193 TEARVNLTEAQLIEAQDNLDISLRELETLLGMPVGVDQLAALTPRFTPQALQPAGYQHWQ 252

Query: 235 EKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYN 294
             A + N  LLA   S  VA+  I    +GHLP +TL        N+  + +N+  ++Y+
Sbjct: 253 SLALRHNAQLLALNQSLAVAKYGIERNRAGHLPQVTLVASTR---NTQSDTENSYNQKYD 309

Query: 295 DFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGA 354
              IG+ + VP++ GG  ++ T+QA+  Y   +++ +    ++  ++R   N + +S   
Sbjct: 310 TRSIGIRVSVPIFAGGGVSAATRQAQERYQQTAREKDEQTATIQTELRRQFNLVTSSQAK 369

Query: 355 LRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQL 414
           +RAYE    SA + + AT+     G R  +DVL+A ++LY A ++L+ ARY ++ + LQL
Sbjct: 370 IRAYELTEKSALALVTATQKSVQGGERVNLDVLNAEQQLYGARRDLTEARYTWLTAWLQL 429

Query: 415 RQAIGTLSEQ 424
           R   GTL EQ
Sbjct: 430 RYYAGTLDEQ 439