Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., outer membrane protein from Magnetospirillum magneticum AMB-1

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 88/420 (20%), Positives = 173/420 (41%), Gaps = 19/420 (4%)

Query: 15  TLSSAVW----AENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGY 70
           T+ +A W    A  L +   +    +PQ+ +     ++A E +  +R+  LP + L+   
Sbjct: 22  TVLAAYWTPVVAGTLEDEMRELVATNPQIQAKMKGVNSADEGIRVARAGYLPTVKLSGDQ 81

Query: 71  NINRSDQAPRESDL--------LSAGINFSQELYQRSSWVS-LDTAEKKARQADSQYAAT 121
                D   R             ++G+  +Q+++   +  S +++A+   R ++S   AT
Sbjct: 82  GHEYIDSPDRRGTQGKPFMDKRNTSGLTVTQKIFDGFATDSTVESAKSTRRISESDLRAT 141

Query: 122 QQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQF 181
           +Q  +L  A AY +V+R    +   R  +  V  Q     +R + G    +DV  A+ + 
Sbjct: 142 RQATLLEGAIAYLDVMRTTKLVALSRENERKVAEQQNLEDERVQKGSGIASDVLQAKQRL 201

Query: 182 DGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQN 241
                  V  E     +     ++ G     +A L           E+ +  +E A++ N
Sbjct: 202 QLAKERRVNYEGEFHAAVARFTQVFGHA-PDVASLSDPPLPLDLIPETLDQSLEAAEKDN 260

Query: 242 LSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGVN 301
            +L +A  S  ++ +  ++A +G+ P+L L G  +Y     ++ KN +     D+ + + 
Sbjct: 261 PTLESASSSIVLSGEKRNIAEAGYYPTLDLVGKADY-----EHGKNATVGVRRDWSLMLV 315

Query: 302 LKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQA 361
               L++G  T +   QA + +  +  +     R   +  R   + I  +   L   E A
Sbjct: 316 ASWELFSGFKTDASVAQASWDHGVSKDNRYHTSRKTAEQTRTAWHKIQTARQRLDLLENA 375

Query: 362 VISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGTL 421
            + A+    AT    D G  T+ +VLD   R+ +A  N + A Y    +  +L   +G L
Sbjct: 376 AVLAEEVWAATMKKRDAGKATVTEVLDEETRINEARINYTGAYYSMYQASYELIALMGRL 435