Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., type I secretion outer membrane protein, TolC family from Kangiella aquimarina DSM 16071

 Score =  266 bits (679), Expect = 1e-75
 Identities = 163/446 (36%), Positives = 252/446 (56%), Gaps = 20/446 (4%)

Query: 3   KLLPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLP 62
           KL+ L V +  G  S A    +L E+Y  A +NDPQ     A   A  + V  SRS+LLP
Sbjct: 8   KLVTLAVLSLSGFSSQA--NTDLLEVYQDALKNDPQYKISEANLRATEQGVRISRSSLLP 65

Query: 63  QINLTA------------GYNINRSDQAPRESDLLSAGINFSQELYQRSSWVSLDTAEKK 110
           Q++ +A            G + + SD    E D  +  +  SQ L+  S WV+L+ AE +
Sbjct: 66  QVSASATKGMSDYDYSGQGLDGSPSDPFSNEVDSTTYRVQLSQSLFDWSRWVALEQAELR 125

Query: 111 ARQADSQYAATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSA 170
            R A+  +AA+ Q L+ R A+AYF+ L  ++ LE  R+EK A+ +QL+ T+++FE GLS+
Sbjct: 126 VRAAELSHAASLQDLMTRTAQAYFQTLSRKEVLEATRSEKEALQQQLDLTREQFESGLSS 185

Query: 171 ITDVHDAQAQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESS 230
            TD  DAQA FD     E++AEN  TN+ EALREITGQ YS+L     +      T  + 
Sbjct: 186 ATDFLDAQANFDQAQVSELVAENEYTNAVEALREITGQYYSELEAAGNEVTLTPPTPANI 245

Query: 231 EALIEKAQQQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSND------N 284
           +  +  A++ NLSL A +    VAR+ +    SGH P+  L+  Y+      D      N
Sbjct: 246 DDWMRAAREANLSLKAKQFDVRVAREEVKRNKSGHYPTADLNVTYSDQETETDRFFPIQN 305

Query: 285 AKNTSGEEYNDFKIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAY 344
               +    + ++ G+ + +PL++G  T++ T+Q++  Y+  + +L+ + R V K+ R  
Sbjct: 306 IDQNTLNMQDGYQAGITVTIPLFSGFRTSAETEQSKQNYLRTTHELDQSDRLVQKNARMA 365

Query: 345 NNNINASIGALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNAR 404
             N+  SI +  A ++A  S+ ++LE+T+ G+  GTR IVDVL ATR  Y A +N+  A+
Sbjct: 366 YTNLQTSIKSFEANKRAYESSINSLESTQEGYQAGTRNIVDVLIATRSAYSAQRNMIRAK 425

Query: 405 YDYILSVLQLRQAIGTLSEQDVMDVN 430
           YDY++S LQL+ A GTL+E+D+  VN
Sbjct: 426 YDYLISSLQLKAAAGTLTEKDIEAVN 451