Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., TolC family outer membrane protein from Erwinia tracheiphila SCR3

 Score =  133 bits (335), Expect = 1e-35
 Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 14/410 (3%)

Query: 22  AENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGYNINRSDQAPRE 81
           A NL +    A   D +  +    RDA  +      + LLP+I+L++ +       A   
Sbjct: 22  AANLQQSVLAASYWDSEYRAAVELRDAEGQKRYQGFAGLLPEISLSSTWYKQDQPGATYA 81

Query: 82  SDLL--SAGINFSQELYQRSSWVSLDTAEKKARQADSQYAATQQGLILRVAKAYFEVLRA 139
           + +   +  IN  Q L+  S + +   AE  A  AD+ +   QQ LI  VA AYF VL  
Sbjct: 82  AGIKHHNYSINLQQPLFDLSRYATWQRAEAAANAADATFMLAQQKLIQNVASAYFGVLFT 141

Query: 140 QDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQFDGVLADEVLAENSLTNSY 199
           +  L+  + E      QLE+ KQ   +G     D+ +AQA +D    D + A++ L+ + 
Sbjct: 142 RKKLDTFQRESKGYKFQLEKAKQALAIGDGTQLDMDEAQASYDRSNTDMLTAQDELSQAG 201

Query: 200 EALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQNLSLLAARISQDVARDNIS 259
                +TG    ++   D  +       E+ + ++++A Q N +++AA    + AR +++
Sbjct: 202 IDFNRLTGLSADEIKEGDL-QCLFQPVRENMDTVVKRAVQNNFNVVAALYHLEEARADVT 260

Query: 260 LASSGHLPSLTLDGGYNYGNNSN--------DNAKNTSGEEYNDFKIGVNLKVPLYTGGN 311
            A++ HLP ++L     YGNN +        D    T+ +  N   IGVN+ VPL+ GG 
Sbjct: 261 AAAAAHLPVVSLQA--TYGNNWSRAENGNLLDEVFGTTSKTRNTL-IGVNVSVPLFAGGK 317

Query: 312 TTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQAVISAKSALEA 371
             S + +A          +E A R V +        +  ++  + + ++   S++  L++
Sbjct: 318 MLSQSFEASSRRNQNLMLVEDARRKVAQQTTVSWLGLKNNLEKIHSLKKLQHSSRKKLDS 377

Query: 372 TEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGTL 421
           T  G +VG RT++D  +A + LY + ++L+ A   ++ + ++L  A G L
Sbjct: 378 TIYGKEVGLRTLLDQFEAEKDLYRSIQDLAAAENKFLQTKIELDAATGEL 427