Pairwise Alignments

Query, 438 a.a., outer membrane protein TolC from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., type I secretion outer membrane protein, TolC family from Enterobacter asburiae PDN3

 Score =  373 bits (958), Expect = e-108
 Identities = 204/440 (46%), Positives = 291/440 (66%), Gaps = 9/440 (2%)

Query: 1   MKKLLPLFVSAALGTLSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSAL 60
           MKKLLP+ +  +L   S+   AENL ++Y QA+  +P L   AA RDAAFE +  +RS L
Sbjct: 1   MKKLLPILIGLSLTGFSAMSQAENLLQVYQQARLGNPDLRKSAADRDAAFEKINEARSPL 60

Query: 61  LPQINLTAGYNINRS--DQAPRESDLLSAGINFSQELYQRSSWVSLDTAEKKARQADSQY 118
           LPQ+ L A Y  +    D     S+  SA +  +Q L+  S W +L   EK A   D  Y
Sbjct: 61  LPQLGLGADYTYSNGFRDANGVNSNATSASLQLTQTLFDMSKWRALTLQEKSAGIQDVTY 120

Query: 119 AATQQGLILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQ 178
              QQ LIL  A AYF VL A D L +  A+K A+ RQL+QT QRF VGL AITDV +A+
Sbjct: 121 QTDQQTLILNTATAYFNVLSAIDALSYTEAQKQAIYRQLDQTTQRFNVGLVAITDVQNAR 180

Query: 179 AQFDGVLADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQ 238
           +Q+D VLA+EV A N+L N+ E+LR++TG  Y +LA L+   F   +  ++  AL+++A+
Sbjct: 181 SQYDTVLANEVTARNNLDNALESLRQVTGNYYPELASLNVDSFKTDKP-QAVNALLKEAE 239

Query: 239 QQNLSLLAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDF-- 296
            +NLSLL AR+SQD+AR+ I  A  GHLP+L+L       + +   +K T+  +Y+D   
Sbjct: 240 NRNLSLLQARLSQDLAREQIRQAQDGHLPTLSLSASTGVSDTTYSGSK-TNTSQYDDSNM 298

Query: 297 ---KIGVNLKVPLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIG 353
              K+G++  +PLY GG   S  KQA++ +V AS+ LE+A+R+VV+ VR+  NN+NASI 
Sbjct: 299 GQNKVGLSFSLPLYQGGQVNSQVKQAQYNFVGASEQLESAHRNVVQTVRSSFNNVNASIS 358

Query: 354 ALRAYEQAVISAKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQ 413
           ++ AY+QAV+SA+S+L+A EAG+ VGTRTIVDVLDAT  LY+A + LS+ARY Y+++ L 
Sbjct: 359 SINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSSARYQYLINQLN 418

Query: 414 LRQAIGTLSEQDVMDVNAGL 433
           ++QA+GTL+EQD+  +N+ L
Sbjct: 419 IKQALGTLNEQDLQMLNSAL 438